C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lactate dehydrogenase B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030246 Ldhb 10090 - 6:142490249-142507957 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032373 Ldhb-001 142490249-142507957 protein_coding
  ENSMUST00000130817 Ldhb-002 142490251-142507921 processed_transcript
  ENSMUST00000134191 Ldhb-003 142495568-142507805 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032373
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032373 102.071±27.96 32.931±4.84 272.235±51.91 245.039±160.46 47.428±23.57 10.752±0.46 888.311±23.50 933.622±68.10 6.643±5.97 102.068±14.40 135.320±43.70 221.861±24.16 208.949±87.30 71.559±3.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090B CIL_00090B_0002 VISTA 6:142366341-142969080
CIL_0005PS CIL_0005PS_0002 CGP 6:142422613-142507957
CIL_0005PV CIL_0005PV_0002 CGP 6:142490249-142571356

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004457 IEA lactate dehydrogenase activity
GO:0004459 IDA L-lactate dehydrogenase activity
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0006089 IEA lactate metabolic process
GO:0006096 IEA glycolytic process
GO:0016020 IEA membrane
GO:0019244 IC lactate biosynthetic process from pyruvate
GO:0019674 IEA NAD metabolic process
GO:0019900 IEA kinase binding
GO:0042802 IEA identical protein binding
GO:0044262 IEA cellular carbohydrate metabolic process
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019644 ldhba lactate dehydrogenase Ba protein_coding Danio_rerio
ENSDARG00000071076 ldhbb lactate dehydrogenase Bb protein_coding Danio_rerio
ENSG00000111716 LDHB lactate dehydrogenase B protein_coding Homo_sapiens

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