C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005PV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000111716-ENSG00000121361 CGP 9606 12:21635342-21775581
GeneTranscriptPositionBiotype
ENSG00000111716 (LDHB)
lactate dehydrogenase B 		ENST00000350669 (LDHB-001) 21635342-21657842 protein_coding
ENST00000396075 (LDHB-004) 21638368-21657362 protein_coding
ENST00000396076 (LDHB-002) 21635342-21657794 protein_coding
ENST00000450584 (LDHB-003) 21643946-21657839 protein_coding
ENST00000470280 (LDHB-006) 21643545-21654570 retained_intron
ENST00000470985 (LDHB-008) 21635342-21638538 retained_intron
ENST00000535112 (LDHB-011) 21654657-21757831 processed_transcript
ENST00000539782 (LDHB-010) 21644050-21757857 protein_coding
ENST00000542765 (LDHB-009) 21635342-21637374 retained_intron
ENST00000544151 (LDHB-007) 21654355-21657971 retained_intron
ENSG00000121361 (KCNJ8)
potassium inwardly-rectifying channel, subfamily J, member 8 		ENST00000240662 (KCNJ8-001) 21764955-21774821 protein_coding
ENST00000537950 (KCNJ8-002) 21773275-21775581 protein_coding
ENSG00000256615 (RP11-59N23.3)
 ENST00000541860 (RP11-59N23.3-001) 21662313-21760032 antisense
CIL_0005PV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030246-ENSMUSG00000030247 CGP 10090 6:142490249-142571356
GeneTranscriptPositionBiotype
ENSMUSG00000030246 (Ldhb)
lactate dehydrogenase B 		ENSMUST00000032373 (Ldhb-001) 142490249-142507957 protein_coding
ENSMUST00000130817 (Ldhb-002) 142490251-142507921 processed_transcript
ENSMUST00000134191 (Ldhb-003) 142495568-142507805 protein_coding
ENSMUSG00000030247 (Kcnj8)
potassium inwardly-rectifying channel, subfamily J, member 8 		ENSMUST00000032374 (Kcnj8-201) 142564939-142571356 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005PV_0001ENSG00000111716ENST00000350669ENST00000396075ENST00000396076ENST00000450584ENST00000470280ENST00000470985ENST00000535112ENST00000539782ENST00000542765ENST00000544151ENSG00000121361ENST00000240662ENST00000537950ENSG00000256615ENST00000541860CIL_0005PV_0002ENSMUSG00000030246ENSMUST00000032373ENSMUST00000130817ENSMUST00000134191ENSMUSG00000030247ENSMUST00000032374
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005PV_0001ENSG00000111716ENST00000350669ENST00000396075ENST00000470985ENST00000539782ENSG00000121361ENST00000240662ENST00000537950ENSG00000256615ENST00000541860CIL_0005PV_0002ENSMUSG00000030246ENSMUST00000032373ENSMUSG00000030247ENSMUST00000032374
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111716 ENST00000350669 311.437±0.00 178.892±0.00 39.453±0.00 247.707±176.51 180.697±171.95 111.846±98.64 363.314±299.62 320.387±319.34 10.663±3.93 61.969±47.82 51.057±0.00 166.786±78.35 135.413±51.44 114.370±70.30
ENST00000396075 N/A N/A 181.643±0.00 229.412±0.00 31.681±0.00 52.622±0.00 224.255±0.00 17.664±0.00 94.590±0.00 53.825±0.00 56.153±0.00 110.262±5.97 113.863±0.00 32.405±0.00
ENST00000396076 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 125.893±0.00 N/A N/A
ENST00000535112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539782 N/A N/A N/A N/A N/A N/A N/A 3.670±0.00 N/A N/A N/A N/A N/A N/A
ENST00000542765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000121361 ENST00000240662 13.143±0.00 4.244±0.00 1.321±0.00 0.760±0.29 3.279±0.00 7.270±0.00 6.043±3.17 3.554±1.70 3.331±2.17 2.553±1.08 3.505±0.00 4.121±3.22 2.828±0.63 1.083±0.78
ENST00000537950 N/A N/A N/A N/A N/A 0.818±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000256615 ENST00000541860 N/A N/A 0.945±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030246 ENSMUST00000032373 102.071±27.96 32.931±4.84 272.235±51.91 245.039±160.46 47.428±23.57 10.752±0.46 888.311±23.50 933.622±68.10 6.643±5.97 102.068±14.40 135.320±43.70 221.861±24.16 208.949±87.30 71.559±3.43
ENSMUST00000130817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000030247 ENSMUST00000032374 15.738±6.56 4.871±0.78 7.242±0.18 2.450±1.53 10.988±1.37 9.106±2.25 17.616±0.81 3.857±1.12 1.301±0.64 5.108±0.51 4.894±1.57 11.311±5.02 0.502±0.41 0.614±0.36

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