C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005PS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000111713-ENSG00000111716 CGP 9606 12:21536189-21757857
GeneTranscriptPositionBiotype
ENSG00000111713 (GYS2)
glycogen synthase 2 (liver) 		ENST00000261195 (GYS2-001) 21536189-21604847 protein_coding
ENSG00000111716 (LDHB)
lactate dehydrogenase B 		ENST00000350669 (LDHB-001) 21635342-21657842 protein_coding
ENST00000396075 (LDHB-004) 21638368-21657362 protein_coding
ENST00000396076 (LDHB-002) 21635342-21657794 protein_coding
ENST00000450584 (LDHB-003) 21643946-21657839 protein_coding
ENST00000470280 (LDHB-006) 21643545-21654570 retained_intron
ENST00000470985 (LDHB-008) 21635342-21638538 retained_intron
ENST00000535112 (LDHB-011) 21654657-21757831 processed_transcript
ENST00000539782 (LDHB-010) 21644050-21757857 protein_coding
ENST00000542765 (LDHB-009) 21635342-21637374 retained_intron
ENST00000544151 (LDHB-007) 21654355-21657971 retained_intron
ENSG00000134548 (SPX)
spexin hormone 		ENST00000256969 (SPX-001) 21526307-21532947 protein_coding
ENST00000535033 (SPX-005) 21527044-21532523 retained_intron
ENST00000535139 (SPX-002) 21527435-21532523 retained_intron
ENST00000537527 (SPX-007) 21527952-21537377 processed_transcript
ENST00000543800 (SPX-003) 21527936-21532523 processed_transcript
ENST00000544637 (SPX-006) 21527301-21531524 processed_transcript
ENST00000546199 (SPX-004) 21527131-21531485 nonsense_mediated_decay
ENSG00000256615 (RP11-59N23.3)
 ENST00000541860 (RP11-59N23.3-001) 21662313-21760032 antisense
CIL_0005PS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030244-ENSMUSG00000030246 CGP 10090 6:142422613-142507957
GeneTranscriptPositionBiotype
ENSMUSG00000030244 (Gys2)
glycogen synthase 2 		ENSMUST00000032371 (Gys2-001) 142422613-142473109 protein_coding
ENSMUST00000126939 (Gys2-002) 142422617-142423619 processed_transcript
ENSMUSG00000030246 (Ldhb)
lactate dehydrogenase B 		ENSMUST00000032373 (Ldhb-001) 142490249-142507957 protein_coding
ENSMUST00000130817 (Ldhb-002) 142490251-142507921 processed_transcript
ENSMUST00000134191 (Ldhb-003) 142495568-142507805 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005PS_0001ENSG00000111713ENST00000261195ENSG00000111716ENST00000350669ENST00000396075ENST00000396076ENST00000450584ENST00000470280ENST00000470985ENST00000535112ENST00000539782ENST00000542765ENST00000544151ENSG00000134548ENST00000256969ENST00000535033ENST00000535139ENST00000537527ENST00000543800ENST00000544637ENST00000546199ENSG00000256615ENST00000541860CIL_0005PS_0002ENSMUSG00000030244ENSMUST00000032371ENSMUST00000126939ENSMUSG00000030246ENSMUST00000032373ENSMUST00000130817ENSMUST00000134191
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005PS_0001ENSG00000111713ENST00000261195ENSG00000111716ENST00000350669ENST00000396075ENST00000470985ENST00000539782ENSG00000134548ENST00000256969ENST00000535033ENST00000535139ENST00000543800ENST00000544637ENST00000546199ENSG00000256615ENST00000541860CIL_0005PS_0002ENSMUSG00000030244ENSMUST00000032371ENSMUST00000126939ENSMUSG00000030246ENSMUST00000032373
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111713 ENST00000261195 0.787±0.00 0.049±0.00 N/A N/A 0.078±0.00 0.087±0.00 N/A 28.081±0.00 17.358±0.00 N/A N/A 0.044±0.01 N/A 0.080±0.02
ENSG00000111716 ENST00000350669 311.437±0.00 178.892±0.00 39.453±0.00 247.707±176.51 180.697±171.95 111.846±98.64 363.314±299.62 320.387±319.34 10.663±3.93 61.969±47.82 51.057±0.00 166.786±78.35 135.413±51.44 114.370±70.30
ENST00000396075 N/A N/A 181.643±0.00 229.412±0.00 31.681±0.00 52.622±0.00 224.255±0.00 17.664±0.00 94.590±0.00 53.825±0.00 56.153±0.00 110.262±5.97 113.863±0.00 32.405±0.00
ENST00000396076 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 125.893±0.00 N/A N/A
ENST00000535112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539782 N/A N/A N/A N/A N/A N/A N/A 3.670±0.00 N/A N/A N/A N/A N/A N/A
ENST00000542765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000134548 ENST00000256969 0.854±0.00 0.021±0.00 1.597±0.00 N/A 2.203±0.00 0.241±0.20 N/A N/A N/A N/A N/A 0.058±0.02 1.032±0.47 N/A
ENST00000535033 N/A N/A 1.089±0.00 2.074±0.00 N/A N/A N/A 5.468±0.00 0.500±0.00 N/A N/A N/A 1.702±0.89 N/A
ENST00000535139 1.424±0.00 N/A N/A 7.053±2.89 3.683±0.00 N/A 1.372±0.99 3.546±0.00 N/A 1.423±0.00 0.763±0.28 0.024±0.00 2.173±0.00 0.509±0.00
ENST00000537527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543800 N/A 0.105±0.00 N/A 0.858±0.00 N/A 0.190±0.00 1.403±0.16 N/A N/A N/A N/A 0.062±0.03 N/A 0.506±0.00
ENST00000544637 N/A N/A N/A N/A 0.180±0.00 N/A N/A N/A N/A N/A N/A N/A 1.039±0.00 N/A
ENST00000546199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.121±0.00 N/A N/A
ENSG00000256615 ENST00000541860 N/A N/A 0.945±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030244 ENSMUST00000032371 4.882±3.92 1.969±0.81 0.026±0.01 0.012±0.01 1.966±0.94 0.063±0.02 0.318±0.15 3.920±1.48 18.395±10.07 0.293±0.14 0.065±0.02 0.326±0.19 1.166±1.56 0.052±0.02
ENSMUST00000126939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.286±0.00
ENSMUSG00000030246 ENSMUST00000032373 102.071±27.96 32.931±4.84 272.235±51.91 245.039±160.46 47.428±23.57 10.752±0.46 888.311±23.50 933.622±68.10 6.643±5.97 102.068±14.40 135.320±43.70 221.861±24.16 208.949±87.30 71.559±3.43
ENSMUST00000130817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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