C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, DHHC domain containing 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125280 Zdhhc13-002 ENSMUSG00000030471 10090 + 7:48789026-48824717 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000125280
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000125280 3.377±0.68 0.970±0.43 2.779±0.00 5.024±2.20 2.864±1.05 12.141±6.58 1.789±0.62 1.861±0.52 1.757±0.93 3.217±1.08 0.445±0.11 9.013±2.88 8.071±0.00 2.742±1.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RI CIL_0008RI_0002 VISTA 7:48524185-49126415
CIL_0008YB CIL_0008YB_0002 VISTA 7:48559718-49163012
CIL_00035X CIL_00035X_0002 CGP 7:48642803-48827440
CIL_0007H7 CIL_0007H7_0003 CGP 7:48789003-48848051

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008152 IEA metabolic process
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0019706 IEA protein-cysteine S-palmitoyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000399351 ZDHHC13-002 protein_coding Homo_sapiens 0 2043
ENST00000446113 ZDHHC13-001 protein_coding Homo_sapiens 0 2002
ENST00000525490 ZDHHC13-003 retained_intron Homo_sapiens 0 1740
ENST00000530100 ZDHHC13-005 retained_intron Homo_sapiens 4e-18 97
ENST00000530698 ZDHHC13-008 processed_transcript Homo_sapiens 0 593
ENST00000532026 ZDHHC13-009 processed_transcript Homo_sapiens 0 383
ENST00000532812 ZDHHC13-007 processed_transcript Homo_sapiens 0 843

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