C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, DHHC domain containing 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118927 Zdhhc13-001 ENSMUSG00000030471 10090 + 7:48789003-48827440 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118927
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118927 2.708±1.27 1.839±0.56 15.425±6.65 7.013±2.88 2.200±0.88 5.508±2.03 1.716±0.59 2.128±0.88 3.547±2.78 2.111±0.70 1.245±0.33 2.592±1.88 20.858±5.67 2.046±0.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RI CIL_0008RI_0002 VISTA 7:48524185-49126415
CIL_0008YB CIL_0008YB_0002 VISTA 7:48559718-49163012
CIL_00035X CIL_00035X_0002 CGP 7:48642803-48827440
CIL_0007H7 CIL_0007H7_0003 CGP 7:48789003-48848051

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0004871 IEA signal transducer activity
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0007165 IEA signal transduction
GO:0008152 IEA metabolic process
GO:0008270 IEA zinc ion binding
GO:0015095 IDA magnesium ion transmembrane transporter activity
GO:0015693 IDA magnesium ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016409 IDA palmitoyltransferase activity
GO:0019706 IEA protein-cysteine S-palmitoyltransferase activity
GO:0030660 IDA Golgi-associated vesicle membrane
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 IEA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000399351 ZDHHC13-002 protein_coding Homo_sapiens 0 2220
ENST00000446113 ZDHHC13-001 protein_coding Homo_sapiens 0 2455
ENST00000525490 ZDHHC13-003 retained_intron Homo_sapiens 0 1700
ENST00000530100 ZDHHC13-005 retained_intron Homo_sapiens 4e-18 97
ENST00000530698 ZDHHC13-008 processed_transcript Homo_sapiens 0 593
ENST00000532026 ZDHHC13-009 processed_transcript Homo_sapiens 0 579
ENST00000532812 ZDHHC13-007 processed_transcript Homo_sapiens 0 843

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