C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytochrome P450, family 2, subfamily r, polypeptide 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030670 Cyp2r1 10090 - 7:114550166-114562972 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032908 Cyp2r1-001 114550166-114562972 protein_coding
  ENSMUST00000119712 Cyp2r1-003 114550233-114562962 protein_coding
  ENSMUST00000128587 Cyp2r1-006 114550247-114554732 nonsense_mediated_decay
  ENSMUST00000133484 Cyp2r1-005 114550247-114554736 processed_transcript
  ENSMUST00000138712 Cyp2r1-002 114550222-114562970 nonsense_mediated_decay
  ENSMUST00000147428 Cyp2r1-004 114550249-114562962 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032908ENSMUST00000119712ENSMUST00000128587ENSMUST00000133484ENSMUST00000138712ENSMUST00000147428
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032908 0.264±0.11 2.039±0.00 0.499±0.10 0.062±0.05 0.269±0.11 0.633±0.15 0.069±0.00 0.223±0.09 1.271±1.27 0.298±0.16 0.037±0.01 0.505±0.30 0.287±0.15 0.431±0.26
ENSMUST00000119712 0.506±0.08 4.106±2.10 N/A 0.144±0.00 1.495±0.77 1.418±0.17 0.046±0.00 0.506±0.19 9.985±2.13 0.667±0.06 N/A 1.228±1.37 N/A N/A
ENSMUST00000128587 N/A N/A N/A N/A N/A N/A 0.065±0.00 N/A N/A N/A N/A 0.080±0.03 N/A N/A
ENSMUST00000133484 N/A N/A N/A N/A N/A N/A 0.053±0.00 N/A 0.211±0.00 N/A N/A 0.225±0.00 0.092±0.00 N/A
ENSMUST00000138712 N/A 5.826±0.00 N/A N/A N/A N/A 0.061±0.00 N/A 0.169±0.00 N/A 0.021±0.00 0.434±0.19 0.131±0.00 N/A
ENSMUST00000147428 N/A N/A 0.141±0.00 N/A 0.793±0.00 N/A N/A 0.444±0.00 N/A N/A 0.046±0.00 0.581±0.50 0.325±0.07 0.469±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZS CIL_0003ZS_0002 CGP 7:114415281-114562972

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004497 IEA monooxygenase activity
GO:0005506 IEA iron ion binding
GO:0005783 IEA endoplasmic reticulum
GO:0016020 IEA membrane
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 IEA heme binding
GO:0030343 IDA vitamin D3 25-hydroxylase activity
GO:0036378 IDA calcitriol biosynthetic process from calciol
GO:0042359 IDA vitamin D metabolic process
GO:0047749 IEA cholestanetriol 26-monooxygenase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056587 cyp2r1 cytochrome P450, family 2, subfamily R, polypeptide 1 protein_coding Danio_rerio
ENSG00000186104 CYP2R1 cytochrome P450, family 2, subfamily R, polypeptide 1 protein_coding Homo_sapiens

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