C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003ZS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000152270-ENSG00000186104 CGP 9606 11:14643723-14892252
GeneTranscriptPositionBiotype
ENSG00000152270 (PDE3B)
phosphodiesterase 3B, cGMP-inhibited 		ENST00000282096 (PDE3B-001) 14643723-14872044 protein_coding
ENST00000455098 (PDE3B-002) 14643831-14869894 protein_coding
ENST00000525439 (PDE3B-004) 14788939-14819206 processed_transcript
ENST00000532740 (PDE3B-005) 14698839-14700926 processed_transcript
ENST00000534317 (PDE3B-003) 14644260-14776663 processed_transcript
ENSG00000186104 (CYP2R1)
cytochrome P450, family 2, subfamily R, polypeptide 1 		ENST00000334636 (CYP2R1-001) 14877440-14892252 protein_coding
ENST00000525015 (CYP2R1-006) 14878012-14885841 nonsense_mediated_decay
ENST00000526276 (CYP2R1-008) 14880315-14891492 processed_transcript
ENST00000526489 (CYP2R1-009) 14880135-14890531 processed_transcript
ENST00000529043 (CYP2R1-007) 14880634-14891530 processed_transcript
ENST00000530609 (CYP2R1-004) 14878009-14891640 nonsense_mediated_decay
ENST00000532378 (CYP2R1-003) 14878038-14891651 protein_coding
ENST00000532641 (CYP2R1-010) 14880337-14885977 processed_transcript
ENST00000532805 (CYP2R1-005) 14878007-14887334 nonsense_mediated_decay
ENST00000534686 (CYP2R1-002) 14878009-14891662 nonsense_mediated_decay
ENSG00000255040 (RP11-677N16.1)
 ENST00000525966 (RP11-677N16.1-001) 14673606-14674555 processed_pseudogene
CIL_0003ZS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030671-ENSMUSG00000030670 CGP 10090 7:114415281-114562972
GeneTranscriptPositionBiotype
ENSMUSG00000030670 (Cyp2r1)
cytochrome P450, family 2, subfamily r, polypeptide 1 		ENSMUST00000032908 (Cyp2r1-001) 114550166-114562972 protein_coding
ENSMUST00000119712 (Cyp2r1-003) 114550233-114562962 protein_coding
ENSMUST00000128587 (Cyp2r1-006) 114550247-114554732 nonsense_mediated_decay
ENSMUST00000133484 (Cyp2r1-005) 114550247-114554736 processed_transcript
ENSMUST00000138712 (Cyp2r1-002) 114550222-114562970 nonsense_mediated_decay
ENSMUST00000147428 (Cyp2r1-004) 114550249-114562962 nonsense_mediated_decay
ENSMUSG00000030671 (Pde3b)
phosphodiesterase 3B, cGMP-inhibited 		ENSMUST00000032909 (Pde3b-001) 114415281-114539251 protein_coding
ENSMUST00000140007 (Pde3b-002) 114506178-114508463 retained_intron
ENSMUST00000149455 (Pde3b-003) 114521734-114531022 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ZS_0001ENSG00000152270ENST00000282096ENST00000455098ENST00000525439ENST00000532740ENST00000534317ENSG00000186104ENST00000334636ENST00000525015ENST00000526276ENST00000526489ENST00000529043ENST00000530609ENST00000532378ENST00000532641ENST00000532805ENST00000534686ENSG00000255040ENST00000525966CIL_0003ZS_0002ENSMUSG00000030670ENSMUST00000032908ENSMUST00000119712ENSMUST00000128587ENSMUST00000133484ENSMUST00000138712ENSMUST00000147428ENSMUSG00000030671ENSMUST00000032909ENSMUST00000140007ENSMUST00000149455
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ZS_0001ENSG00000152270ENST00000282096ENST00000455098ENST00000525439ENST00000532740ENST00000534317ENSG00000186104ENST00000334636ENST00000525015ENST00000526489ENST00000529043ENST00000530609ENST00000532378ENST00000532641ENST00000532805ENST00000534686ENSG00000255040ENST00000525966CIL_0003ZS_0002ENSMUSG00000030670ENSMUST00000032908ENSMUST00000119712ENSMUST00000128587ENSMUST00000133484ENSMUST00000138712ENSMUST00000147428ENSMUSG00000030671ENSMUST00000032909ENSMUST00000149455
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000152270 ENST00000282096 10.298±0.00 1.056±0.00 0.437±0.00 0.792±0.04 10.259±6.41 4.689±0.25 1.081±0.06 2.639±2.28 5.526±0.75 2.893±0.37 0.013±0.00 0.660±0.59 0.926±0.17 4.387±0.49
ENST00000455098 4.975±0.00 0.367±0.00 N/A N/A 7.027±3.20 N/A 0.583±0.00 4.255±0.00 N/A N/A 0.184±0.00 0.341±0.17 0.547±0.12 4.101±1.96
ENST00000525439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.097±0.00 N/A N/A N/A
ENST00000532740 0.109±0.00 0.047±0.00 N/A 0.403±0.00 3.037±0.00 N/A N/A 1.474±0.00 N/A 6.088±0.00 N/A 2.108±0.00 0.036±0.00 0.068±0.00
ENST00000534317 N/A 0.159±0.00 1.298±0.00 0.761±0.00 2.767±0.00 2.239±0.00 0.910±0.00 N/A 4.264±0.00 3.668±0.00 0.062±0.06 1.000±0.74 N/A N/A
ENSG00000186104 ENST00000334636 N/A N/A N/A N/A N/A 0.913±0.00 0.173±0.00 N/A 0.191±0.00 N/A N/A 0.363±0.00 N/A N/A
ENST00000525015 2.396±0.00 N/A N/A 2.525±0.00 N/A N/A N/A 2.252±0.00 2.416±0.00 1.381±0.00 N/A 3.430±0.39 1.141±0.00 9.252±0.00
ENST00000526276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526489 N/A N/A N/A 0.670±0.00 1.119±0.00 1.005±0.00 N/A 1.290±0.00 N/A 1.065±0.00 0.332±0.00 1.647±0.00 0.522±0.00 3.250±0.00
ENST00000529043 N/A N/A 2.360±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530609 N/A 1.733±0.00 N/A N/A 0.581±0.00 0.853±0.00 0.273±0.00 N/A 0.502±0.00 N/A N/A 1.234±0.00 0.688±0.19 3.940±0.51
ENST00000532378 0.883±0.00 2.132±0.00 N/A 0.426±0.00 1.109±0.00 0.447±0.00 0.792±0.00 1.115±0.00 0.424±0.03 0.733±0.00 0.527±0.00 2.039±1.03 0.673±0.45 4.206±1.69
ENST00000532641 N/A N/A N/A N/A N/A N/A N/A N/A 1.205±0.00 N/A 0.406±0.00 2.263±0.00 N/A N/A
ENST00000532805 N/A 0.910±0.00 0.878±0.00 0.613±0.00 N/A N/A 0.159±0.00 0.384±0.00 0.346±0.14 1.364±0.00 N/A N/A N/A N/A
ENST00000534686 0.555±0.00 N/A N/A 0.593±0.00 N/A 0.528±0.00 0.392±0.00 0.835±0.00 N/A N/A 0.507±0.00 1.053±0.10 0.232±0.00 2.314±0.00
ENSG00000255040 ENST00000525966 N/A N/A N/A 0.037±0.00 0.012±0.00 0.011±0.00 N/A 0.087±0.00 0.077±0.00 N/A N/A N/A N/A 0.131±0.11
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030670 ENSMUST00000032908 0.264±0.11 2.039±0.00 0.499±0.10 0.062±0.05 0.269±0.11 0.633±0.15 0.069±0.00 0.223±0.09 1.271±1.27 0.298±0.16 0.037±0.01 0.505±0.30 0.287±0.15 0.431±0.26
ENSMUST00000119712 0.506±0.08 4.106±2.10 N/A 0.144±0.00 1.495±0.77 1.418±0.17 0.046±0.00 0.506±0.19 9.985±2.13 0.667±0.06 N/A 1.228±1.37 N/A N/A
ENSMUST00000128587 N/A N/A N/A N/A N/A N/A 0.065±0.00 N/A N/A N/A N/A 0.080±0.03 N/A N/A
ENSMUST00000133484 N/A N/A N/A N/A N/A N/A 0.053±0.00 N/A 0.211±0.00 N/A N/A 0.225±0.00 0.092±0.00 N/A
ENSMUST00000138712 N/A 5.826±0.00 N/A N/A N/A N/A 0.061±0.00 N/A 0.169±0.00 N/A 0.021±0.00 0.434±0.19 0.131±0.00 N/A
ENSMUST00000147428 N/A N/A 0.141±0.00 N/A 0.793±0.00 N/A N/A 0.444±0.00 N/A N/A 0.046±0.00 0.581±0.50 0.325±0.07 0.469±0.00
ENSMUSG00000030671 ENSMUST00000032909 9.635±3.37 2.680±1.56 4.034±3.15 0.470±0.18 9.840±4.73 0.866±0.12 0.776±0.40 1.998±0.43 4.395±1.93 1.511±0.18 0.441±0.16 1.737±1.39 0.143±0.08 4.901±0.85
ENSMUST00000140007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149455 19.237±0.00 N/A N/A N/A 17.428±4.41 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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