C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 2, subfamily r, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032908 Cyp2r1-001 ENSMUSG00000030670 10090 - 7:114550166-114562972 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032908
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032908 0.264±0.11 2.039±0.00 0.499±0.10 0.062±0.05 0.269±0.11 0.633±0.15 0.069±0.00 0.223±0.09 1.271±1.27 0.298±0.16 0.037±0.01 0.505±0.30 0.287±0.15 0.431±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZS CIL_0003ZS_0002 CGP 7:114415281-114562972

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005506 IEA iron ion binding
GO:0005783 IEA endoplasmic reticulum
GO:0016020 IEA membrane
GO:0020037 IEA heme binding
GO:0030343 IDA vitamin D3 25-hydroxylase activity
GO:0036378 IDA calcitriol biosynthetic process from calciol
GO:0042359 IDA vitamin D metabolic process
GO:0047749 IEA cholestanetriol 26-monooxygenase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334636 CYP2R1-001 protein_coding Homo_sapiens 0 1888
ENST00000525015 CYP2R1-006 nonsense_mediated_decay Homo_sapiens 0 364
ENST00000526276 CYP2R1-008 processed_transcript Homo_sapiens 0 765
ENST00000526489 CYP2R1-009 processed_transcript Homo_sapiens 0 1022
ENST00000529043 CYP2R1-007 processed_transcript Homo_sapiens 0 374
ENST00000530609 CYP2R1-004 nonsense_mediated_decay Homo_sapiens 0 1701
ENST00000532378 CYP2R1-003 protein_coding Homo_sapiens 0 998
ENST00000532641 CYP2R1-010 processed_transcript Homo_sapiens 0 743
ENST00000532805 CYP2R1-005 nonsense_mediated_decay Homo_sapiens 0 684
ENST00000534686 CYP2R1-002 nonsense_mediated_decay Homo_sapiens 0 1016

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