C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger with KRAB and SCAN domains 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030757 Zkscan2 10090 - 7:123479516-123500449 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042470 Zkscan2-001 123479516-123500449 protein_coding
  ENSMUST00000125356 Zkscan2-003 123480142-123484977 protein_coding
  ENSMUST00000128217 Zkscan2-002 123494214-123500449 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042470ENSMUST00000125356ENSMUST00000128217
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042470 0.026±0.01 2.592±0.34 N/A 0.024±0.00 0.026±0.00 0.040±0.02 N/A 0.012±0.00 0.030±0.00 0.192±0.17 0.149±0.08 0.849±0.00
ENSMUST00000125356 N/A N/A N/A N/A 0.048±0.00 0.151±0.00 N/A N/A 0.051±0.00 N/A N/A N/A
ENSMUST00000128217 0.082±0.00 N/A 0.037±0.02 0.074±0.05 0.018±0.01 0.025±0.02 0.029±0.01 0.022±0.00 0.020±0.00 0.112±0.00 0.049±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005KP CIL_0005KP_0002 CGP 7:123462294-123500449
CIL_0003X1 CIL_0003X1_0002 CGP 7:123479516-124398989

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005634 IBA nucleus
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000094859 si:dkey-11o15.10 si:dkey-11o15.10 protein_coding Danio_rerio
ENSDARG00000097059 si:dkey-159n16.4 si:dkey-159n16.4 protein_coding Danio_rerio
ENSDARG00000097776 protein_coding Danio_rerio
ENSG00000155592 ZKSCAN2 zinc finger with KRAB and SCAN domains 2 protein_coding Homo_sapiens

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