C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 141
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000175981 Rnf141-003 ENSMUSG00000030788 10090 - 7:110815146-110837529 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverLungOvaryTestisENSMUST00000175981
Transcript ID Brain Liver Lung Ovary Testis
ENSMUST00000175981 3.434±0.00 4.992±0.88 13.493±0.47 2.753±0.00 5.084±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JA CIL_0004JA_0002 CGP 7:110627661-110812405
CIL_0004J9 CIL_0004J9_0002 CGP 7:110800432-110862953

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0005575 ND cellular_component
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265981 RNF141-001 protein_coding Homo_sapiens 0 857
ENST00000528665 RNF141-002 protein_coding Homo_sapiens 0 545
ENST00000530156 RNF141-004 nonsense_mediated_decay Homo_sapiens 0 388
ENST00000533412 RNF141-005 protein_coding Homo_sapiens 0 544
ENST00000534281 RNF141-003 retained_intron Homo_sapiens 0 316

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