C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030869 Ndufab1 10090 - 7:122085403-122101886 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033157 Ndufab1-001 122085403-122101886 protein_coding
  ENSMUST00000106471 Ndufab1-006 122090831-122101736 protein_coding
  ENSMUST00000123296 Ndufab1-002 122090056-122101851 protein_coding
  ENSMUST00000130857 Ndufab1-008 122090818-122093092 retained_intron
  ENSMUST00000130904 Ndufab1-005 122090833-122093782 retained_intron
  ENSMUST00000139456 Ndufab1-007 122091526-122101735 protein_coding
  ENSMUST00000145863 Ndufab1-009 122094032-122101347 processed_transcript
  ENSMUST00000146022 Ndufab1-003 122096463-122101828 retained_intron
  ENSMUST00000146964 Ndufab1-010 122088458-122091787 retained_intron
  ENSMUST00000153173 Ndufab1-004 122093125-122101706 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033157ENSMUST00000106471ENSMUST00000123296ENSMUST00000130857ENSMUST00000130904ENSMUST00000139456ENSMUST00000146022ENSMUST00000153173
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033157 7.124±0.19 N/A 2.134±0.24 1.862±0.18 3.861±2.08 N/A 5.540±0.07 N/A 2.831±0.64 3.562±0.22 3.742±0.43 2.023±0.27 3.059±0.60 N/A
ENSMUST00000106471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 31.076±0.00 31.318±0.07 36.101±0.00 N/A
ENSMUST00000123296 39.362±0.00 355.697±255.54 N/A N/A 223.962±136.70 102.462±35.99 N/A 115.496±80.57 3.537±0.00 26.046±10.66 14.920±0.00 128.140±86.86 N/A 8.136±0.00
ENSMUST00000130857 N/A N/A 4.504±1.05 5.296±0.00 N/A N/A N/A N/A 3.498±0.55 N/A N/A 5.299±0.84 N/A N/A
ENSMUST00000130904 N/A N/A 33.784±4.61 104.590±103.58 25.500±0.00 N/A 80.449±2.08 N/A 55.174±11.67 N/A 61.791±9.56 112.837±89.20 121.254±112.53 57.196±0.00
ENSMUST00000139456 N/A N/A N/A 72.429±0.00 N/A N/A N/A N/A 48.053±0.00 N/A 105.301±40.72 75.862±0.00 89.508±40.10 21.503±9.41
ENSMUST00000146022 178.299±49.85 1206.641±567.10 N/A 27.060±0.00 335.093±39.07 248.026±37.41 273.589±37.21 293.518±69.97 114.453±36.64 87.822±17.70 N/A 167.767±112.78 N/A 34.482±11.20
ENSMUST00000153173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.609±0.00 8.711±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006D2 CIL_0006D2_0002 CGP 7:122067175-122101886
CIL_0003VC CIL_0003VC_0003 CGP 7:122085403-122132946

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0006633 IEA fatty acid biosynthetic process
GO:0009249 IEA protein lipoylation
GO:0055114 IEA oxidation-reduction process
GO:0070469 IEA respiratory chain

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014915 ndufab1b NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1b protein_coding Danio_rerio
ENSDARG00000058463 ndufab1a NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1a protein_coding Danio_rerio
ENSG00000004779 NDUFAB1 NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa protein_coding Homo_sapiens

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