C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033157 Ndufab1-001 ENSMUSG00000030869 10090 - 7:122085403-122101886 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverLungMuscleOvaryPlacentaENSMUST00000033157
Transcript ID Adipose Bladder Brain Breast Heart Liver Lung Muscle Ovary Placenta
ENSMUST00000033157 7.124±0.19 2.134±0.24 1.862±0.18 3.861±2.08 5.540±0.07 2.831±0.64 3.562±0.22 3.742±0.43 2.023±0.27 3.059±0.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006D2 CIL_0006D2_0002 CGP 7:122067175-122101886
CIL_0003VC CIL_0003VC_0003 CGP 7:122085403-122132946

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0006633 IEA fatty acid biosynthetic process
GO:0009249 IEA protein lipoylation
GO:0055114 IEA oxidation-reduction process
GO:0070469 IEA respiratory chain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000007516 NDUFAB1-001 protein_coding Homo_sapiens 0 597
ENST00000484769 NDUFAB1-002 nonsense_mediated_decay Homo_sapiens 0 405
ENST00000562133 NDUFAB1-004 protein_coding Homo_sapiens 0 309
ENST00000567761 NDUFAB1-003 protein_coding Homo_sapiens 0 303
ENST00000570319 NDUFAB1-005 protein_coding Homo_sapiens 0 532

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