C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123296 Ndufab1-002 ENSMUSG00000030869 10090 - 7:122090056-122101851 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungMuscleOvaryTestisENSMUST00000123296
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000123296 39.362±0.00 355.697±255.54 223.962±136.70 102.462±35.99 115.496±80.57 3.537±0.00 26.046±10.66 14.920±0.00 128.140±86.86 8.136±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006D2 CIL_0006D2_0002 CGP 7:122067175-122101886
CIL_0003VC CIL_0003VC_0003 CGP 7:122085403-122132946

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0006633 IEA fatty acid biosynthetic process
GO:0055114 IEA oxidation-reduction process
GO:0070469 IEA respiratory chain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000007516 NDUFAB1-001 protein_coding Homo_sapiens 0 590
ENST00000484769 NDUFAB1-002 nonsense_mediated_decay Homo_sapiens 0 409
ENST00000562133 NDUFAB1-004 protein_coding Homo_sapiens 0 313
ENST00000567761 NDUFAB1-003 protein_coding Homo_sapiens 0 303
ENST00000570319 NDUFAB1-005 protein_coding Homo_sapiens 0 532

Loading