C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033383 Usp11-001 ENSMUSG00000031066 10090 + X:20703906-20720539 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033383
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033383 5.691±4.37 9.342±1.76 4.279±0.45 38.308±8.42 4.084±0.90 1.666±0.55 2.335±0.41 2.930±0.59 2.731±2.32 5.619±0.35 0.454±0.15 18.640±5.38 5.270±1.92 1.751±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GD CIL_0005GD_0002 CGP X:20687954-20720539

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004843 ISS ubiquitin-specific protease activity
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005737 IEA cytoplasm
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0016579 ISS protein deubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000218348 USP11-201 protein_coding Homo_sapiens 0 1784
ENST00000377078 USP11-005 protein_coding Homo_sapiens 0 946
ENST00000377107 USP11-002 protein_coding Homo_sapiens 0 1784
ENST00000469080 USP11-008 retained_intron Homo_sapiens 0 1724
ENST00000489030 USP11-006 retained_intron Homo_sapiens 0 305

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