C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149960 Usp11-003 ENSMUSG00000031066 10090 + X:20711825-20720537 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000149960
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000149960 2.210±0.56 1.348±0.04 5.124±0.37 1.085±0.00 0.348±0.00 0.248±0.00 0.568±0.00 0.506±0.42 1.070±0.00 0.201±0.06 4.571±0.00 1.114±0.00 0.275±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GD CIL_0005GD_0002 CGP X:20687954-20720539

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000218348 USP11-201 protein_coding Homo_sapiens 0 1574
ENST00000377078 USP11-005 protein_coding Homo_sapiens 0 865
ENST00000377107 USP11-002 protein_coding Homo_sapiens 0 1574
ENST00000469080 USP11-008 retained_intron Homo_sapiens 0 1574
ENST00000489030 USP11-006 retained_intron Homo_sapiens 0 305

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