C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptotagmin-like 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113297 Sytl4-002 ENSMUSG00000031255 10090 - X:133936385-133981783 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000113297
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000113297 0.192±0.01 0.634±0.06 0.526±0.07 0.080±0.05 0.223±0.10 0.078±0.03 0.271±0.09 0.115±0.00 3.974±3.31 0.213±0.12 1.366±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BB CIL_0007BB_0002 CGP X:133908426-133981812
CIL_0007BC CIL_0007BC_0002 CGP X:133936385-134086819

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005543 IDA phospholipid binding
GO:0006886 IEA intracellular protein transport
GO:0006887 IDA exocytosis
GO:0008270 IEA:NAS zinc ion binding
GO:0017137 IEA Rab GTPase binding
GO:0019898 IDA extrinsic component of membrane
GO:0030141 IDA secretory granule
GO:0042043 IDA neurexin family protein binding
GO:0046676 IMP negative regulation of insulin secretion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263033 SYTL4-002 protein_coding Homo_sapiens 0 1652
ENST00000265651 FBXO3-001 protein_coding Homo_sapiens 0.00006 55
ENST00000276141 SYTL4-201 protein_coding Homo_sapiens 0 1644
ENST00000372981 SYTL4-003 protein_coding Homo_sapiens 0 211
ENST00000372989 SYTL4-001 protein_coding Homo_sapiens 0 1644
ENST00000491602 SYTL4-004 processed_transcript Homo_sapiens 0 333
ENST00000526785 FBXO3-008 protein_coding Homo_sapiens 0.00006 55
ENST00000530013 FBXO3-009 retained_intron Homo_sapiens 0.00006 55
ENST00000530401 FBXO3-002 protein_coding Homo_sapiens 0.00006 55
ENST00000531080 FBXO3-005 protein_coding Homo_sapiens 0.00006 55
ENST00000532057 FBXO3-006 protein_coding Homo_sapiens 0.00006 55

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