C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptotagmin-like 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033608 Sytl4-001 ENSMUSG00000031255 10090 - X:133936385-133981812 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000033608
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000033608 0.703±0.01 0.522±0.11 0.387±0.10 0.119±0.00 0.154±0.12 0.808±0.25 0.210±0.05 0.272±0.20 0.327±0.10 0.469±0.13 0.172±0.05 2.533±2.04 0.334±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BB CIL_0007BB_0002 CGP X:133908426-133981812
CIL_0007BC CIL_0007BC_0002 CGP X:133936385-134086819

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005543 IDA phospholipid binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005768 IEA endosome
GO:0005813 IEA centrosome
GO:0006886 IEA intracellular protein transport
GO:0006887 IDA exocytosis
GO:0008270 IEA:NAS zinc ion binding
GO:0017137 IEA Rab GTPase binding
GO:0019898 IDA extrinsic component of membrane
GO:0030141 IDA secretory granule
GO:0042043 IDA neurexin family protein binding
GO:0045921 IEA positive regulation of exocytosis
GO:0046676 IMP negative regulation of insulin secretion
GO:0050714 IEA positive regulation of protein secretion
GO:0071985 IEA multivesicular body sorting pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263033 SYTL4-002 protein_coding Homo_sapiens 0 2641
ENST00000265651 FBXO3-001 protein_coding Homo_sapiens 0.00007 55
ENST00000276141 SYTL4-201 protein_coding Homo_sapiens 0 2645
ENST00000372981 SYTL4-003 protein_coding Homo_sapiens 0 211
ENST00000372989 SYTL4-001 protein_coding Homo_sapiens 0 2645
ENST00000491602 SYTL4-004 processed_transcript Homo_sapiens 0 675
ENST00000526785 FBXO3-008 protein_coding Homo_sapiens 0.00007 55
ENST00000530013 FBXO3-009 retained_intron Homo_sapiens 0.00007 55
ENST00000530401 FBXO3-002 protein_coding Homo_sapiens 0.00007 55
ENST00000531080 FBXO3-005 protein_coding Homo_sapiens 0.00007 55
ENST00000532057 FBXO3-006 protein_coding Homo_sapiens 0.00007 55

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