C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: retinoblastoma binding protein 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031353 Rbbp7 10090 + X:162760402-162779092 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033720 Rbbp7-001 162760402-162779092 protein_coding
  ENSMUST00000112326 Rbbp7-002 162760462-162775895 protein_coding
  ENSMUST00000112327 Rbbp7-003 162760421-162778756 protein_coding
  ENSMUST00000138791 Rbbp7-005 162761066-162772230 protein_coding
  ENSMUST00000143681 Rbbp7-004 162774578-162778445 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033720ENSMUST00000112326ENSMUST00000112327
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033720 7.549±2.73 N/A 56.617±5.63 27.031±3.02 N/A N/A 7.634±1.36 7.145±1.29 92.357±29.94 7.434±0.00 20.225±3.13 56.202±38.19 168.204±22.11 5.899±1.82
ENSMUST00000112326 35.389±17.94 24.535±5.20 37.673±0.00 13.330±0.00 21.565±5.70 19.868±6.70 20.997±7.05 21.241±3.83 23.648±21.30 20.493±4.97 7.523±0.20 78.049±17.87 90.236±7.97 17.184±3.19
ENSMUST00000112327 23.535±12.00 12.361±1.71 34.734±1.98 29.422±18.27 15.815±1.13 11.533±2.91 18.095±0.77 17.225±1.35 30.397±22.63 17.955±2.30 14.804±2.83 42.178±36.49 169.590±117.65 13.696±4.74

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003723 IPI RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006260 IEA DNA replication
GO:0006338 TAS chromatin remodeling
GO:0006351 IEA transcription, DNA-templated
GO:0016581 ISS NuRD complex
GO:0030308 ISS negative regulation of cell growth
GO:0035098 ISS ESC/E(Z) complex
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0070370 ISS cellular heat acclimation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015208 rbb4l retinoblastoma binding protein 4, like protein_coding Danio_rerio
ENSG00000102054 RBBP7 retinoblastoma binding protein 7 protein_coding Homo_sapiens

Loading