C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, class VI, type 11A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033818 Atp11a-001 ENSMUSG00000031441 10090 + 8:12757014-12868728 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000033818
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000033818 12.506±6.01 8.956±1.36 9.088±1.58 2.724±0.00 5.964±0.55 4.069±1.37 8.052±1.92 17.130±7.50 0.531±0.17 39.774±2.94 5.973±1.02 9.744±2.76 20.519±19.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SC CIL_0008SC_0002 VISTA 8:12162372-12763356
CIL_00014E CIL_00014E_0002 CGP 8:12757014-13020905

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005524 IEA ATP binding
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 IEA phospholipid translocation
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000375630 ATP11A-201 protein_coding Homo_sapiens 0 3336
ENST00000375645 ATP11A-202 protein_coding Homo_sapiens 0 3336
ENST00000418678 ATP11A-003 protein_coding Homo_sapiens 0 2785
ENST00000459908 ATP11A-002 retained_intron Homo_sapiens 0 2385
ENST00000471555 ATP11A-011 nonsense_mediated_decay Homo_sapiens 0 987
ENST00000487903 ATP11A-001 protein_coding Homo_sapiens 0 3336
ENST00000489577 ATP11A-012 processed_transcript Homo_sapiens 0 268

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