C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cholinergic receptor, nicotinic, beta polypeptide 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031492 Chrnb3 10090 + 8:27368711-27399729 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000060943 Chrnb3-201 27368711-27399729 protein_coding
  ENSMUST00000079463 Chrnb3-202 27368711-27399729 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000060943ENSMUST00000079463
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000060943 0.017±0.01 N/A 0.196±0.15 0.006±0.00 0.006±0.00 0.002±0.00 N/A 0.006±0.00 N/A 0.165±0.06
ENSMUST00000079463 0.007±0.00 0.007±0.00 N/A 0.018±0.01 0.006±0.00 0.007±0.00 0.037±0.00 N/A 0.006±0.00 0.092±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009C5 CIL_0009C5_0002 VISTA 8:26806327-27408431
CIL_0007QT CIL_0007QT_0002 VISTA 8:26806345-27408424
CIL_0002IT CIL_0002IT_0002 CGP 8:27368711-27413944

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004889 IEA acetylcholine-activated cation-selective channel activity
GO:0005892 IEA acetylcholine-gated channel complex
GO:0008144 IEA drug binding
GO:0030054 IEA cell junction
GO:0042166 IEA acetylcholine binding
GO:0043005 IEA neuron projection
GO:0045211 IEA postsynaptic membrane
GO:0051291 IEA protein heterooligomerization
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038508 chrnb3b cholinergic receptor, nicotinic, beta polypeptide 3b protein_coding Danio_rerio
ENSDARG00000052764 chrnb3a cholinergic receptor, nicotinic, beta polypeptide 3a protein_coding Danio_rerio
ENSG00000147432 CHRNB3 cholinergic receptor, nicotinic, beta 3 (neuronal) protein_coding Homo_sapiens

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