C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: beta-carotene oxygenase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031845 Bcmo1 10090 + 8:117095854-117133720 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034308 Bcmo1-001 117095854-117133720 protein_coding
  ENSMUST00000167370 Bcmo1-201 117095865-117131218 protein_coding
  ENSMUST00000176860 Bcmo1-002 117095998-117133316 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034308ENSMUST00000167370ENSMUST00000176860
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034308 0.066±0.03 0.044±0.01 0.026±0.02 0.167±0.01 0.345±0.10 0.013±0.00 1.086±0.29 3.027±0.71 0.106±0.02 0.017±0.00 0.117±0.05 2.156±1.78 7.082±3.29
ENSMUST00000167370 0.014±0.00 N/A 0.020±0.00 0.150±0.07 0.608±0.15 0.024±0.01 0.243±0.05 N/A 0.040±0.00 0.015±0.00 0.187±0.08 0.792±0.00 N/A
ENSMUST00000176860 N/A N/A N/A N/A 0.254±0.14 N/A 0.235±0.00 N/A 0.078±0.00 N/A 0.166±0.00 0.211±0.15 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019F CIL_00019F_0002 CGP 8:117095854-117205834

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001523 IDA retinoid metabolic process
GO:0003834 ISS beta-carotene 15,15'-monooxygenase activity
GO:0004497 IEA monooxygenase activity
GO:0042572 IEA retinol metabolic process
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029446 bcmo1l beta-carotene 15,15'-monooxygenase 1-like protein_coding Danio_rerio
ENSDARG00000034369 bcmo1 beta-carotene 15,15'-monooxygenase 1 protein_coding Danio_rerio
ENSG00000135697 BCO1 beta-carotene oxygenase 1 protein_coding Homo_sapiens

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