C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: beta-carotene oxygenase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176860 Bcmo1-002 ENSMUSG00000031845 10090 + 8:117095998-117133316 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyLungOvaryPlacentaENSMUST00000176860
Transcript ID Colon Kidney Lung Ovary Placenta
ENSMUST00000176860 0.254±0.14 0.235±0.00 0.078±0.00 0.166±0.00 0.211±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019F CIL_00019F_0002 CGP 8:117095854-117205834

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003834 ISS beta-carotene 15,15'-monooxygenase activity
GO:0055114 ISS oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258168 BCO1-001 protein_coding Homo_sapiens 0 1439
ENST00000563804 BCO1-002 nonsense_mediated_decay Homo_sapiens 0 1092
ENST00000564552 BCO1-003 protein_coding Homo_sapiens 0 536

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