C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034428 Gabarapl2-001 ENSMUSG00000031950 10090 + 8:111940703-111953612 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034428
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034428 12.941±1.57 23.668±1.17 19.176±2.48 20.433±1.21 12.003±4.25 24.107±3.91 17.867±6.08 30.857±4.99 20.174±3.65 26.903±3.76 15.663±8.28 9.291±3.10 16.108±6.29 9.696±3.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000288 CIL_000288_0002 CGP 8:111912018-111953612
CIL_0001GX CIL_0001GX_0002 CGP 8:111940703-111992302

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0000421 IEA autophagic vacuole membrane
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005776 ISS autophagic vacuole
GO:0005794 IDA Golgi apparatus
GO:0006891 ISA intra-Golgi vesicle-mediated transport
GO:0006914 IEA autophagy
GO:0015031 IEA protein transport
GO:0031410 IEA cytoplasmic vesicle
GO:1901799 IEA negative regulation of proteasomal protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000037243 GABARAPL2-001 protein_coding Homo_sapiens 0 1118
ENST00000563744 GABARAPL2-002 protein_coding Homo_sapiens 0 710
ENST00000565057 GABARAPL2-004 protein_coding Homo_sapiens 0 411
ENST00000565985 GABARAPL2-003 processed_transcript Homo_sapiens 0 712
ENST00000568455 GABARAPL2-006 protein_coding Homo_sapiens 0 636

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