C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 2, regulatory subunit A, beta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032058 Ppp2r1b 10090 + 9:50845301-50894229 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034560 Ppp2r1b-001 50856924-50894229 protein_coding
  ENSMUST00000114437 Ppp2r1b-002 50856937-50881431 protein_coding
  ENSMUST00000174555 Ppp2r1b-003 50845301-50861761 processed_transcript
  ENSMUST00000174628 Ppp2r1b-004 50856924-50892797 protein_coding
  ENSMUST00000175640 Ppp2r1b-008 50856966-50879934 protein_coding
  ENSMUST00000175645 Ppp2r1b-007 50856957-50880087 protein_coding
  ENSMUST00000175926 Ppp2r1b-006 50856979-50880407 nonsense_mediated_decay
  ENSMUST00000176055 Ppp2r1b-010 50870084-50880029 nonsense_mediated_decay
  ENSMUST00000176349 Ppp2r1b-005 50856963-50892804 protein_coding
  ENSMUST00000176414 Ppp2r1b-011 50878085-50879136 retained_intron
  ENSMUST00000176798 Ppp2r1b-009 50856964-50892797 protein_coding
  ENSMUST00000177454 Ppp2r1b-012 50873012-50878062 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114437ENSMUST00000174628ENSMUST00000175640ENSMUST00000176798
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114437 29.781±7.89 7.134±0.16 9.793±1.22 12.131±7.37 24.644±3.19 5.947±0.50 2.116±0.41 7.801±0.77 13.566±11.92 8.482±0.98 1.227±0.25 7.523±1.18 7.497±3.62 N/A
ENSMUST00000174628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.725±5.29
ENSMUST00000175640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.733±0.00 N/A
ENSMUST00000176798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.448±5.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003WK CIL_0003WK_0002 CGP 9:50775019-50894229
CIL_0003WH CIL_0003WH_0003 CGP 9:50845301-51009073

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0045121 IEA membrane raft
GO:0060561 IEA apoptotic process involved in morphogenesis
GO:0070062 IEA extracellular vesicular exosome
GO:2001241 IEA positive regulation of extrinsic apoptotic signaling pathway in absence of ligand

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007791 ppp2r1a protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform protein_coding Danio_rerio
ENSDARG00000032430 ppp2r1b protein phosphatase 2 (formerly 2A), regulatory subunit A, beta isoform protein_coding Danio_rerio
ENSG00000137713 PPP2R1B protein phosphatase 2, regulatory subunit A, beta protein_coding Homo_sapiens

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