C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 2, regulatory subunit A, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114437 Ppp2r1b-002 ENSMUSG00000032058 10090 + 9:50856937-50881431 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000114437
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000114437 29.781±7.89 7.134±0.16 9.793±1.22 12.131±7.37 24.644±3.19 5.947±0.50 2.116±0.41 7.801±0.77 13.566±11.92 8.482±0.98 1.227±0.25 7.523±1.18 7.497±3.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003WK CIL_0003WK_0002 CGP 9:50775019-50894229
CIL_0003WH CIL_0003WH_0003 CGP 9:50845301-51009073

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311129 PPP2R1B-004 protein_coding Homo_sapiens 0 2167
ENST00000341980 PPP2R1B-005 protein_coding Homo_sapiens 0 1197
ENST00000393055 PPP2R1B-003 protein_coding Homo_sapiens 0 1423
ENST00000426998 PPP2R1B-002 protein_coding Homo_sapiens 0 1770
ENST00000527614 PPP2R1B-001 protein_coding Homo_sapiens 0 2538
ENST00000529672 PPP2R1B-010 retained_intron Homo_sapiens 8.99634e-43 178
ENST00000531373 PPP2R1B-008 protein_coding Homo_sapiens 0 351
ENST00000531890 PPP2R1B-009 protein_coding Homo_sapiens 0 575
ENST00000534500 PPP2R1B-007 nonsense_mediated_decay Homo_sapiens 0 438
ENST00000534521 PPP2R1B-006 nonsense_mediated_decay Homo_sapiens 0 1796

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