C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protease, serine 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032091 Tmprss4 10090 - 9:45172726-45204092 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034599 Tmprss4-001 45172726-45204092 protein_coding
  ENSMUST00000163237 Tmprss4-003 45173305-45204060 processed_transcript
  ENSMUST00000163945 Tmprss4-005 45174797-45180653 retained_intron
  ENSMUST00000165263 Tmprss4-004 45173305-45203976 nonsense_mediated_decay
  ENSMUST00000170069 Tmprss4-002 45172727-45204090 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034599ENSMUST00000163237ENSMUST00000163945ENSMUST00000165263ENSMUST00000170069
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034599 1.128±0.28 0.825±0.03 N/A 0.544±0.26 29.570±5.43 N/A N/A 0.036±0.02 4.537±0.32 N/A 1.000±0.41 0.325±0.19 N/A
ENSMUST00000163237 2.900±0.05 1.281±0.35 0.014±0.00 0.898±0.46 52.247±7.24 0.113±0.00 0.447±0.18 0.099±0.06 7.769±0.18 0.032±0.00 1.601±0.90 0.193±0.05 0.101±0.05
ENSMUST00000163945 N/A 0.651±0.00 0.092±0.00 0.729±0.00 N/A 0.138±0.10 0.330±0.00 0.064±0.06 N/A 0.047±0.01 0.388±0.01 0.236±0.00 N/A
ENSMUST00000165263 N/A N/A 0.055±0.00 0.366±0.00 N/A N/A N/A 0.090±0.07 N/A N/A 0.884±0.07 0.313±0.19 0.036±0.00
ENSMUST00000170069 N/A N/A 0.084±0.00 0.344±0.00 N/A N/A 0.172±0.03 N/A N/A N/A 0.978±0.35 N/A 0.026±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081E CIL_00081E_0002 VISTA 9:44577224-45180192
CIL_0003MB CIL_0003MB_0002 CGP 9:45138437-45204092

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004252 IEA serine-type endopeptidase activity
GO:0005044 IEA scavenger receptor activity
GO:0006508 IEA proteolysis
GO:0006898 IEA receptor-mediated endocytosis
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006693 tmprss4a transmembrane protease, serine 4a protein_coding Danio_rerio
ENSDARG00000012860 tmprss4b transmembrane protease, serine 4b protein_coding Danio_rerio
ENSG00000137648 TMPRSS4 transmembrane protease, serine 4 protein_coding Homo_sapiens

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