C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protease, serine 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034599 Tmprss4-001 ENSMUSG00000032091 10090 - 9:45172726-45204092 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonLiverLungOvaryPlacentaENSMUST00000034599
Transcript ID Adipose Bladder Breast Colon Liver Lung Ovary Placenta
ENSMUST00000034599 1.128±0.28 0.825±0.03 0.544±0.26 29.570±5.43 0.036±0.02 4.537±0.32 1.000±0.41 0.325±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081E CIL_00081E_0002 VISTA 9:44577224-45180192
CIL_0003MB CIL_0003MB_0002 CGP 9:45138437-45204092

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 IEA serine-type endopeptidase activity
GO:0005044 IEA scavenger receptor activity
GO:0006508 IEA proteolysis
GO:0006898 IEA receptor-mediated endocytosis
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000437212 TMPRSS4-004 protein_coding Homo_sapiens 0 1129
ENST00000517483 TMPRSS4-007 nonsense_mediated_decay Homo_sapiens 0 1127
ENST00000517544 TMPRSS4-015 protein_coding Homo_sapiens 0 307
ENST00000519236 TMPRSS4-002 nonsense_mediated_decay Homo_sapiens 0 837
ENST00000519813 TMPRSS4-012 retained_intron Homo_sapiens 0 303
ENST00000522307 TMPRSS4-005 protein_coding Homo_sapiens 0 1005
ENST00000522462 TMPRSS4-020 retained_intron Homo_sapiens 0 302
ENST00000522824 TMPRSS4-008 protein_coding Homo_sapiens 0 1064
ENST00000523251 TMPRSS4-006 protein_coding Homo_sapiens 0 1070
ENST00000523770 TMPRSS4-014 retained_intron Homo_sapiens 0 202
ENST00000528118 TMPRSS4-021 retained_intron Homo_sapiens 0 586
ENST00000534111 TMPRSS4-001 protein_coding Homo_sapiens 0 1151
ENST00000610964 TMPRSS4-201 protein_coding Homo_sapiens 0 1116
ENST00000616579 TMPRSS4-202 protein_coding Homo_sapiens 0 1070
ENST00000618855 TMPRSS4-203 protein_coding Homo_sapiens 0 1129

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