C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protease, serine 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165263 Tmprss4-004 ENSMUSG00000032091 10090 - 9:45173305-45203976 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLiverOvaryPlacentaTestisENSMUST00000165263
Transcript ID Brain Breast Liver Ovary Placenta Testis
ENSMUST00000165263 0.055±0.00 0.366±0.00 0.090±0.07 0.884±0.07 0.313±0.19 0.036±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081E CIL_00081E_0002 VISTA 9:44577224-45180192
CIL_0003MB CIL_0003MB_0002 CGP 9:45138437-45204092

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 IEA serine-type endopeptidase activity
GO:0005044 IEA scavenger receptor activity
GO:0006508 IEA proteolysis
GO:0006898 IEA receptor-mediated endocytosis
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000437212 TMPRSS4-004 protein_coding Homo_sapiens 0 817
ENST00000517483 TMPRSS4-007 nonsense_mediated_decay Homo_sapiens 0 815
ENST00000517544 TMPRSS4-015 protein_coding Homo_sapiens 0 307
ENST00000519236 TMPRSS4-002 nonsense_mediated_decay Homo_sapiens 0 1009
ENST00000519813 TMPRSS4-012 retained_intron Homo_sapiens 0 303
ENST00000522307 TMPRSS4-005 protein_coding Homo_sapiens 0 693
ENST00000522462 TMPRSS4-020 retained_intron Homo_sapiens 0 302
ENST00000522824 TMPRSS4-008 protein_coding Homo_sapiens 0 754
ENST00000523251 TMPRSS4-006 protein_coding Homo_sapiens 0 760
ENST00000534111 TMPRSS4-001 protein_coding Homo_sapiens 0 839
ENST00000610964 TMPRSS4-201 protein_coding Homo_sapiens 0 804
ENST00000616579 TMPRSS4-202 protein_coding Homo_sapiens 0 760
ENST00000618855 TMPRSS4-203 protein_coding Homo_sapiens 0 817

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