C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003MB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000062416-ENSDARG00000006693 CGP 7955 15:12961296-13033028
GeneTranscriptPositionBiotype
ENSDARG00000006693 (tmprss4a)
transmembrane protease, serine 4a
ENSDART00000101301 (tmprss4a-001) 13002899-13026259 protein_coding
ENSDART00000131290 (tmprss4a-003) 13010500-13033028 protein_coding
ENSDART00000136238 (tmprss4a-002) 13007505-13026014 protein_coding
ENSDARG00000062416 (scn4ba)
sodium channel, voltage-gated, type IV, beta a
ENSDART00000090267 (scn4ba-001) 12961296-12995382 protein_coding
CIL_0003MB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046480-ENSMUSG00000032091 CGP 10090 9:45138437-45204092
GeneTranscriptPositionBiotype
ENSMUSG00000032091 (Tmprss4)
transmembrane protease, serine 4
ENSMUST00000034599 (Tmprss4-001) 45172726-45204092 protein_coding
ENSMUST00000163237 (Tmprss4-003) 45173305-45204060 processed_transcript
ENSMUST00000163945 (Tmprss4-005) 45174797-45180653 retained_intron
ENSMUST00000165263 (Tmprss4-004) 45173305-45203976 nonsense_mediated_decay
ENSMUST00000170069 (Tmprss4-002) 45172727-45204090 nonsense_mediated_decay
ENSMUSG00000046480 (Scn4b)
sodium channel, type IV, beta
ENSMUST00000060125 (Scn4b-001) 45138437-45154152 protein_coding
ENSMUSG00000091659 (Gm17099)
predicted gene 17099
ENSMUST00000166780 (Gm17099-001) 45172997-45175161 antisense
ENSMUSG00000091996 (BC049352)
cDNA sequence BC049352
ENSMUST00000164650 (BC049352-002) 45182034-45250020 protein_coding
ENSMUST00000171277 (BC049352-003) 45182007-45192968 processed_transcript
ENSMUST00000171799 (BC049352-001) 45195766-45250020 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003MB_0001ENSDARG00000006693ENSDART00000101301ENSDART00000131290ENSDART00000136238ENSDARG00000062416ENSDART00000090267CIL_0003MB_0002ENSMUSG00000032091ENSMUST00000034599ENSMUST00000163237ENSMUST00000163945ENSMUST00000165263ENSMUST00000170069ENSMUSG00000046480ENSMUST00000060125ENSMUSG00000091659ENSMUST00000166780ENSMUSG00000091996ENSMUST00000164650ENSMUST00000171277ENSMUST00000171799
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003MB_0001ENSDARG00000006693ENSDART00000101301ENSDART00000131290ENSDART00000136238ENSDARG00000062416ENSDART00000090267CIL_0003MB_0002ENSMUSG00000032091ENSMUST00000034599ENSMUST00000163237ENSMUST00000163945ENSMUST00000165263ENSMUST00000170069ENSMUSG00000046480ENSMUST00000060125ENSMUSG00000091659ENSMUST00000166780ENSMUSG00000091996ENSMUST00000164650ENSMUST00000171277ENSMUST00000171799
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006693 ENSDART00000101301 N/A N/A N/A 0.364±0.00 N/A N/A 0.445±0.15 3.659±1.44 0.030±0.00 N/A 0.155±0.00 N/A N/A N/A
ENSDART00000131290 N/A N/A N/A N/A N/A N/A N/A N/A 0.197±0.00 N/A N/A N/A N/A N/A
ENSDART00000136238 N/A N/A N/A N/A N/A N/A 0.146±0.00 N/A N/A N/A 0.308±0.00 N/A N/A N/A
ENSDARG00000062416 ENSDART00000090267 N/A N/A N/A N/A N/A N/A 10.511±1.13 0.274±0.22 N/A N/A 1.007±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032091 ENSMUST00000034599 1.128±0.28 N/A 0.825±0.03 N/A 0.544±0.26 29.570±5.43 N/A N/A 0.036±0.02 4.537±0.32 N/A 1.000±0.41 0.325±0.19 N/A
ENSMUST00000163237 2.900±0.05 N/A 1.281±0.35 0.014±0.00 0.898±0.46 52.247±7.24 0.113±0.00 0.447±0.18 0.099±0.06 7.769±0.18 0.032±0.00 1.601±0.90 0.193±0.05 0.101±0.05
ENSMUST00000163945 N/A N/A 0.651±0.00 0.092±0.00 0.729±0.00 N/A 0.138±0.10 0.330±0.00 0.064±0.06 N/A 0.047±0.01 0.388±0.01 0.236±0.00 N/A
ENSMUST00000165263 N/A N/A N/A 0.055±0.00 0.366±0.00 N/A N/A N/A 0.090±0.07 N/A N/A 0.884±0.07 0.313±0.19 0.036±0.00
ENSMUST00000170069 N/A N/A N/A 0.084±0.00 0.344±0.00 N/A N/A 0.172±0.03 N/A N/A N/A 0.978±0.35 N/A 0.026±0.00
ENSMUSG00000046480 ENSMUST00000060125 0.246±0.02 0.242±0.09 0.544±0.03 8.392±11.77 6.044±5.10 0.070±0.02 2.524±0.11 6.643±0.24 0.089±0.10 0.389±0.17 73.216±15.76 0.150±0.04 0.025±0.01 0.030±0.01
ENSMUSG00000091659 ENSMUST00000166780 2.922±2.79 N/A 1.754±0.00 0.050±0.01 2.030±0.55 N/A 0.117±0.00 1.032±0.21 0.131±0.05 N/A N/A 2.805±1.78 0.933±0.32 N/A
ENSMUSG00000091996 ENSMUST00000164650 0.265±0.03 0.109±0.08 N/A 0.445±0.00 0.553±0.19 N/A 0.194±0.00 0.320±0.08 0.082±0.05 0.072±0.04 0.207±0.08 0.088±0.07 N/A 0.583±0.00
ENSMUST00000171277 0.496±0.20 0.143±0.01 N/A 0.205±0.18 1.043±0.45 0.343±0.17 N/A 1.081±0.28 0.132±0.08 0.145±0.02 0.440±0.09 0.123±0.06 N/A N/A
ENSMUST00000171799 N/A 0.047±0.00 0.041±0.00 0.021±0.01 0.308±0.16 0.143±0.07 0.042±0.02 N/A 0.053±0.02 0.108±0.02 N/A 0.114±0.08 0.035±0.03 0.186±0.15

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