C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coactivator-associated arginine methyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032185 Carm1 10090 + 9:21546894-21589487 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034703 Carm1-001 21546894-21589467 protein_coding
  ENSMUST00000115394 Carm1-005 21546923-21589467 protein_coding
  ENSMUST00000115395 Carm1-003 21546913-21589487 protein_coding
  ENSMUST00000130032 Carm1-002 21546978-21589467 nonsense_mediated_decay
  ENSMUST00000130100 Carm1-009 21587403-21588129 processed_transcript
  ENSMUST00000132011 Carm1-008 21587218-21588200 processed_transcript
  ENSMUST00000139871 Carm1-007 21575104-21580339 processed_transcript
  ENSMUST00000147749 Carm1-006 21547158-21579467 processed_transcript
  ENSMUST00000154049 Carm1-004 21546923-21589467 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034703ENSMUST00000115395ENSMUST00000130032ENSMUST00000154049
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034703 25.478±5.21 21.153±4.77 8.764±1.77 16.731±8.16 19.031±5.25 11.202±2.78 17.230±3.45 10.452±0.46 10.010±4.45 11.372±2.39 17.359±3.50 17.596±6.22 15.464±5.32 35.054±15.49
ENSMUST00000115395 10.137±0.00 N/A N/A N/A 8.133±0.11 8.871±1.58 N/A N/A N/A 8.213±0.00 N/A 13.766±1.90 11.979±4.37 N/A
ENSMUST00000130032 N/A 18.259±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.445±0.00 N/A 31.954±0.63
ENSMUST00000154049 8.437±0.00 N/A N/A N/A 8.638±0.42 6.262±0.16 N/A N/A N/A 6.829±0.37 N/A 14.810±3.58 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002S5 CIL_0002S5_0002 CGP 9:21526176-21589487
CIL_0004ZT CIL_0004ZT_0003 CGP 9:21546894-21592831

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003420 IMP regulation of growth plate cartilage chondrocyte proliferation
GO:0003713 IDA transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005829 IDA cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0006479 IMP protein methylation
GO:0008276 IDA protein methyltransferase activity
GO:0008284 IMP positive regulation of cell proliferation
GO:0009405 IEA pathogenesis
GO:0016274 IDA protein-arginine N-methyltransferase activity
GO:0016571 IDA histone methylation
GO:0019919 IDA peptidyl-arginine methylation, to asymmetrical-dimethyl arginine
GO:0030374 IDA ligand-dependent nuclear receptor transcription coactivator activity
GO:0030518 IDA intracellular steroid hormone receptor signaling pathway
GO:0030520 IGI intracellular estrogen receptor signaling pathway
GO:0032091 IDA negative regulation of protein binding
GO:0033146 IDA regulation of intracellular estrogen receptor signaling pathway
GO:0034969 IDA histone arginine methylation
GO:0034970 IEA histone H3-R2 methylation
GO:0034971 IDA histone H3-R17 methylation
GO:0035242 IDA protein-arginine omega-N asymmetric methyltransferase activity
GO:0035246 IDA peptidyl-arginine N-methylation
GO:0035642 IDA histone methyltransferase activity (H3-R17 specific)
GO:0042054 IDA histone methyltransferase activity
GO:0042803 IPI protein homodimerization activity
GO:0044212 IMP transcription regulatory region DNA binding
GO:0045600 IMP positive regulation of fat cell differentiation
GO:0051591 IEA response to cAMP
GO:0060350 IMP endochondral bone morphogenesis
GO:0070577 IDA lysine-acetylated histone binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018698 carm1 coactivator-associated arginine methyltransferase 1 protein_coding Danio_rerio
ENSG00000142453 CARM1 coactivator-associated arginine methyltransferase 1 protein_coding Homo_sapiens

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