C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coactivator-associated arginine methyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154049 Carm1-004 ENSMUSG00000032185 10090 + 9:21546923-21589467 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonLungOvaryENSMUST00000154049
Transcript ID Adipose Breast Colon Lung Ovary
ENSMUST00000154049 8.437±0.00 8.638±0.42 6.262±0.16 6.829±0.37 14.810±3.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002S5 CIL_0002S5_0002 CGP 9:21526176-21589487
CIL_0004ZT CIL_0004ZT_0003 CGP 9:21546894-21592831

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000145908 carm1l-001 protein_coding Danio_rerio 6e-40 171
ENSDART00000122397 carm1l-201 protein_coding Danio_rerio 6e-30 137
ENST00000253031 YIPF2-001 protein_coding Homo_sapiens 2e-32 145
ENST00000327064 CARM1-002 protein_coding Homo_sapiens 0 2250
ENST00000344150 CARM1-003 protein_coding Homo_sapiens 0 2200
ENST00000586221 CARM1-001 nonsense_mediated_decay Homo_sapiens 0 1369
ENST00000586298 CARM1-010 protein_coding Homo_sapiens 0 255
ENST00000586508 CARM1-006 retained_intron Homo_sapiens 0 643
ENST00000586748 YIPF2-002 protein_coding Homo_sapiens 2e-32 145
ENST00000588947 CARM1-008 protein_coding Homo_sapiens 0 370
ENST00000589693 CARM1-005 nonsense_mediated_decay Homo_sapiens 0 361
ENST00000589971 YIPF2-009 protein_coding Homo_sapiens 9e-33 145
ENST00000590039 CARM1-009 nonsense_mediated_decay Homo_sapiens 0 438
ENST00000590699 CARM1-004 nonsense_mediated_decay Homo_sapiens 0 1555
ENST00000592516 CARM1-007 retained_intron Homo_sapiens 0 276
ENST00000592646 YIPF2-010 protein_coding Homo_sapiens 1e-32 145

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