C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: interactor of little elongation complex ELL subunit 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032235 Narg2 10090 + 9:69397906-69433122 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034761 Narg2-001 69397906-69433122 protein_coding
  ENSMUST00000117246 Narg2-002 69397937-69407953 protein_coding
  ENSMUST00000117610 Narg2-003 69397933-69407696 protein_coding
  ENSMUST00000125938 Narg2-006 69397927-69407322 protein_coding
  ENSMUST00000131233 Narg2-008 69397957-69410178 nonsense_mediated_decay
  ENSMUST00000142743 Narg2-004 69397923-69432070 retained_intron
  ENSMUST00000145538 Narg2-007 69397935-69407334 protein_coding
  ENSMUST00000146368 Narg2-009 69416715-69425705 processed_transcript
  ENSMUST00000147558 Narg2-010 69416873-69427024 retained_intron
  ENSMUST00000151667 Narg2-005 69398648-69407181 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034761ENSMUST00000142743
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034761 0.964±0.16 N/A 2.652±0.22 1.833±1.21 0.918±0.00 1.399±0.30 0.517±0.21 0.657±0.12 2.138±1.17 0.802±0.13 0.583±0.20 2.283±1.04 2.609±1.22 0.824±0.23
ENSMUST00000142743 0.457±0.13 0.482±0.03 0.259±0.00 0.604±0.04 0.292±0.00 0.267±0.11 0.163±0.04 0.398±0.00 0.353±0.08 0.593±0.00 0.095±0.00 0.608±0.06 0.386±0.06 0.215±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GZ CIL_0005GZ_0002 CGP 9:68653786-69433122
CIL_0007LQ CIL_0007LQ_0002 UCNEbase 9:69347863-69845139

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0008023 ISS transcription elongation factor complex
GO:0015030 ISS Cajal body
GO:0035327 ISS transcriptionally active chromatin
GO:0035363 ISS histone locus body
GO:0042795 ISS snRNA transcription from RNA polymerase II promoter
GO:0042796 ISS snRNA transcription from RNA polymerase III promoter
GO:0045945 ISS positive regulation of transcription from RNA polymerase III promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086670 narg2 NMDA receptor regulated 2 protein_coding Danio_rerio
ENSG00000128915 ICE2 interactor of little elongator complex ELL subunit 2 protein_coding Homo_sapiens

Loading