C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: propionyl Coenzyme A carboxylase, beta polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149322 Pccb-002 ENSMUSG00000032527 10090 - 9:100982032-101034877 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaENSMUST00000149322
Transcript ID Brain Ovary Placenta
ENSMUST00000149322 8.271±0.00 14.467±0.00 5.306±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WP CIL_0000WP_0002 CGP 9:100597798-101034898
CIL_00019E CIL_00019E_0002 CGP 9:100982032-101104800

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004658 ISS propionyl-CoA carboxylase activity
GO:0005739 IDA mitochondrion
GO:0008152 IEA metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000251654 PCCB-001 protein_coding Homo_sapiens 0 1118
ENST00000459873 PCCB-019 protein_coding Homo_sapiens 0 492
ENST00000462542 PCCB-017 protein_coding Homo_sapiens 0 492
ENST00000462637 PCCB-010 protein_coding Homo_sapiens 0 1118
ENST00000465176 PCCB-020 processed_transcript Homo_sapiens 0 327
ENST00000465423 PCCB-014 protein_coding Homo_sapiens 0 449
ENST00000466072 PCCB-011 protein_coding Homo_sapiens 0 643
ENST00000468777 PCCB-009 protein_coding Homo_sapiens 0 1118
ENST00000469217 PCCB-003 protein_coding Homo_sapiens 0 1118
ENST00000471595 PCCB-002 protein_coding Homo_sapiens 0 1081
ENST00000473073 PCCB-005 retained_intron Homo_sapiens 0 501
ENST00000474833 PCCB-016 processed_transcript Homo_sapiens 4e-31 139
ENST00000475214 PCCB-004 retained_intron Homo_sapiens 0 492
ENST00000478469 PCCB-006 protein_coding Homo_sapiens 0 601
ENST00000482086 PCCB-013 protein_coding Homo_sapiens 0 1118
ENST00000483687 PCCB-008 protein_coding Homo_sapiens 0 1118
ENST00000484181 PCCB-012 nonsense_mediated_decay Homo_sapiens 0 606
ENST00000490504 PCCB-007 protein_coding Homo_sapiens 0 1118
ENST00000494742 PCCB-018 protein_coding Homo_sapiens 0 449

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