C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: propionyl Coenzyme A carboxylase, beta polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035116 Pccb-001 ENSMUSG00000032527 10090 - 9:100982032-101034898 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035116
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035116 91.306±23.06 98.071±9.40 25.638±3.07 15.961±5.72 78.334±9.68 80.863±1.77 54.982±2.16 169.617±16.54 63.028±42.87 34.492±1.42 34.770±1.16 41.356±12.86 12.339±7.81 5.152±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WP CIL_0000WP_0002 CGP 9:100597798-101034898
CIL_00019E CIL_00019E_0002 CGP 9:100982032-101104800

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004658 ISS propionyl-CoA carboxylase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0008152 IEA metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000251654 PCCB-001 protein_coding Homo_sapiens 0 1877
ENST00000459873 PCCB-019 protein_coding Homo_sapiens 0 645
ENST00000462542 PCCB-017 protein_coding Homo_sapiens 0 603
ENST00000462637 PCCB-010 protein_coding Homo_sapiens 0 1502
ENST00000465176 PCCB-020 processed_transcript Homo_sapiens 0 414
ENST00000465423 PCCB-014 protein_coding Homo_sapiens 0 449
ENST00000466072 PCCB-011 protein_coding Homo_sapiens 0 1240
ENST00000468777 PCCB-009 protein_coding Homo_sapiens 0 1504
ENST00000469217 PCCB-003 protein_coding Homo_sapiens 0 1502
ENST00000471595 PCCB-002 protein_coding Homo_sapiens 0 1840
ENST00000473073 PCCB-005 retained_intron Homo_sapiens 0 1005
ENST00000474833 PCCB-016 processed_transcript Homo_sapiens 4e-31 139
ENST00000475214 PCCB-004 retained_intron Homo_sapiens 0 1266
ENST00000478469 PCCB-006 protein_coding Homo_sapiens 0 1020
ENST00000482086 PCCB-013 protein_coding Homo_sapiens 0 1384
ENST00000483687 PCCB-008 protein_coding Homo_sapiens 0 1399
ENST00000484181 PCCB-012 nonsense_mediated_decay Homo_sapiens 0 1382
ENST00000490504 PCCB-007 protein_coding Homo_sapiens 0 1273
ENST00000494742 PCCB-018 protein_coding Homo_sapiens 0 449

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