C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: muscle glycogen phosphorylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113483 Pygm-004 ENSMUSG00000032648 10090 + 19:6384415-6398448 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000113483
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000113483 0.820±0.00 12.890±3.63 0.091±0.00 86.118±7.87 1.981±0.74 43.067±0.00 1.899±0.00 0.388±0.17 2.447±0.58 1.775±0.00 0.167±0.01 0.431±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YW CIL_0001YW_0002 CGP 19:6363690-6398459

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005980 IDA glycogen catabolic process
GO:0008184 IDA glycogen phosphorylase activity
GO:0030170 IEA pyridoxal phosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000164139 PYGM-001 protein_coding Homo_sapiens 0 2682
ENST00000216392 PYGL-001 protein_coding Homo_sapiens 0 1002
ENST00000216962 PYGB-001 protein_coding Homo_sapiens 0 1317
ENST00000377432 PYGM-002 protein_coding Homo_sapiens 0 2944
ENST00000460413 PYGM-005 processed_transcript Homo_sapiens 0 346
ENST00000483742 PYGM-003 retained_intron Homo_sapiens 0 555
ENST00000532462 PYGL-003 protein_coding Homo_sapiens 0 977
ENST00000544180 PYGL-002 protein_coding Homo_sapiens 0 1002
ENST00000553872 PYGL-010 retained_intron Homo_sapiens 0 276

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