C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001YW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000008188-ENSDARG00000013317 CGP 7955 7:23976996-24019264
GeneTranscriptPositionBiotype
ENSDARG00000008188 (sf1)
splicing factor 1 		ENSDART00000020212 (sf1-002) 23977039-23987907 nonsense_mediated_decay
ENSDART00000126037 (sf1-001) 23977029-23987907 protein_coding
ENSDART00000139321 (sf1-004) 23984363-23986088 retained_intron
ENSDART00000143455 (sf1-003) 23976996-23983573 protein_coding
ENSDARG00000013317 (pygmb)
phosphorylase, glycogen (muscle) b 		ENSDART00000101459 (pygmb-201) 23990980-24019260 protein_coding
ENSDART00000127467 (pygmb-202) 23991139-24019264 protein_coding
ENSDART00000148576 (pygmb-001) 23990989-24017079 protein_coding
ENSDART00000149993 (pygmb-003) 23991065-24018837 protein_coding
CIL_0001YW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024949-ENSMUSG00000032648 CGP 10090 19:6363690-6398459
GeneTranscriptPositionBiotype
ENSMUSG00000024949 (Sf1)
splicing factor 1 		ENSMUST00000113485 (Sf1-012) 6363922-6377202 nonsense_mediated_decay
ENSMUST00000113487 (Sf1-001) 6363922-6377196 protein_coding
ENSMUST00000113488 (Sf1-003) 6363810-6376512 protein_coding
ENSMUST00000113489 (Sf1-013) 6363719-6377203 protein_coding
ENSMUST00000124667 (Sf1-014) 6374010-6376512 protein_coding
ENSMUST00000125516 (Sf1-008) 6373621-6376654 protein_coding
ENSMUST00000131083 (Sf1-004) 6363922-6365955 retained_intron
ENSMUST00000131252 (Sf1-002) 6363690-6378030 protein_coding
ENSMUST00000131677 (Sf1-007) 6372413-6372921 retained_intron
ENSMUST00000144239 (Sf1-006) 6370712-6371694 retained_intron
ENSMUST00000144409 (Sf1-009) 6364194-6372193 nonsense_mediated_decay
ENSMUST00000146298 (Sf1-005) 6363963-6368784 retained_intron
ENSMUST00000154260 (Sf1-011) 6370119-6372092 processed_transcript
ENSMUST00000155973 (Sf1-010) 6364557-6372619 protein_coding
ENSMUST00000162237 (Sf1-015) 6374129-6375780 protein_coding
ENSMUSG00000032648 (Pygm)
muscle glycogen phosphorylase 		ENSMUST00000035269 (Pygm-001) 6384399-6398459 protein_coding
ENSMUST00000113483 (Pygm-004) 6384415-6398448 protein_coding
ENSMUST00000139775 (Pygm-002) 6397495-6398291 retained_intron
ENSMUST00000142755 (Pygm-003) 6392711-6394184 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001YW_0001ENSDARG00000008188ENSDART00000020212ENSDART00000126037ENSDART00000139321ENSDART00000143455ENSDARG00000013317ENSDART00000101459ENSDART00000127467ENSDART00000148576ENSDART00000149993CIL_0001YW_0002ENSMUSG00000024949ENSMUST00000113485ENSMUST00000113487ENSMUST00000113488ENSMUST00000113489ENSMUST00000124667ENSMUST00000125516ENSMUST00000131083ENSMUST00000131252ENSMUST00000131677ENSMUST00000144239ENSMUST00000144409ENSMUST00000146298ENSMUST00000154260ENSMUST00000155973ENSMUST00000162237ENSMUSG00000032648ENSMUST00000035269ENSMUST00000113483ENSMUST00000139775ENSMUST00000142755
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001YW_0001ENSDARG00000008188ENSDART00000020212ENSDART00000126037ENSDARG00000013317ENSDART00000101459ENSDART00000127467ENSDART00000148576CIL_0001YW_0002ENSMUSG00000024949ENSMUST00000113485ENSMUST00000113487ENSMUST00000125516ENSMUST00000131083ENSMUST00000131252ENSMUST00000144409ENSMUST00000155973ENSMUSG00000032648ENSMUST00000035269ENSMUST00000113483ENSMUST00000139775ENSMUST00000142755
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008188 ENSDART00000020212 N/A N/A N/A 15.844±11.03 N/A N/A 14.085±10.31 34.123±6.82 1.361±0.00 N/A 2.942±0.00 N/A N/A N/A
ENSDART00000126037 N/A N/A N/A 17.327±6.83 N/A N/A 5.955±0.91 5.225±0.00 N/A N/A 1.976±0.00 N/A N/A N/A
ENSDART00000139321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000013317 ENSDART00000101459 N/A N/A N/A 81.789±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000127467 N/A N/A N/A 38.612±13.26 N/A N/A 49.257±0.69 0.824±0.00 0.162±0.00 N/A 2.168±0.00 N/A N/A N/A
ENSDART00000148576 N/A N/A N/A N/A N/A N/A 37.403±0.00 0.957±0.00 N/A N/A 2.117±0.00 N/A N/A N/A
ENSDART00000149993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024949 ENSMUST00000113485 14.085±1.14 40.571±6.88 18.859±3.51 28.738±7.85 34.249±8.40 18.820±2.45 9.887±2.23 11.886±2.42 8.932±2.45 36.391±5.38 11.577±1.80 27.167±7.73 23.136±8.99 18.106±2.28
ENSMUST00000113487 17.176±1.08 44.850±6.06 30.405±5.95 39.196±11.16 46.539±14.94 25.802±5.49 12.353±3.03 18.344±3.14 21.477±9.34 71.181±0.00 15.351±1.62 32.663±6.95 41.278±16.28 25.651±4.84
ENSMUST00000113488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000113489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125516 N/A N/A N/A N/A N/A 43.760±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 221.372±0.00 143.294±0.00 217.111±0.00
ENSMUST00000131252 9.601±0.16 N/A N/A 8.036±0.00 N/A 7.168±0.00 N/A 7.854±1.06 6.005±2.11 N/A N/A 12.404±0.83 5.878±0.00 13.092±1.11
ENSMUST00000131677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 143.162±0.00
ENSMUST00000146298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155973 N/A N/A N/A 170.134±0.00 N/A N/A N/A N/A N/A N/A N/A 144.678±75.31 238.246±101.62 240.000±0.00
ENSMUST00000162237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000032648 ENSMUST00000035269 8.758±4.95 25.698±2.88 17.287±2.24 3.985±4.65 231.049±150.34 4.672±1.47 358.335±32.29 10.431±5.47 0.578±0.31 35.423±21.66 2753.109±131.54 8.132±1.43 0.778±0.43 1.008±0.46
ENSMUST00000113483 0.820±0.00 12.890±3.63 N/A 0.091±0.00 86.118±7.87 1.981±0.74 43.067±0.00 1.899±0.00 0.388±0.17 2.447±0.58 N/A 1.775±0.00 0.167±0.01 0.431±0.00
ENSMUST00000139775 N/A N/A N/A 17.551±0.00 N/A N/A N/A N/A 0.855±0.09 N/A N/A 9.861±0.00 1.619±0.20 4.611±0.00
ENSMUST00000142755 N/A N/A N/A 10.266±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.596±0.00 7.830±0.00

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