C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: muscle glycogen phosphorylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035269 Pygm-001 ENSMUSG00000032648 10090 + 19:6384399-6398459 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035269
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035269 8.758±4.95 25.698±2.88 17.287±2.24 3.985±4.65 231.049±150.34 4.672±1.47 358.335±32.29 10.431±5.47 0.578±0.31 35.423±21.66 2753.109±131.54 8.132±1.43 0.778±0.43 1.008±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YW CIL_0001YW_0002 CGP 19:6363690-6398459

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005980 IDA glycogen catabolic process
GO:0008184 IDA glycogen phosphorylase activity
GO:0030170 IEA pyridoxal phosphate binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000164139 PYGM-001 protein_coding Homo_sapiens 0 3271
ENST00000216392 PYGL-001 protein_coding Homo_sapiens 0 1323
ENST00000216962 PYGB-001 protein_coding Homo_sapiens 0 1622
ENST00000377432 PYGM-002 protein_coding Homo_sapiens 0 2682
ENST00000460413 PYGM-005 processed_transcript Homo_sapiens 0 346
ENST00000483742 PYGM-003 retained_intron Homo_sapiens 0 555
ENST00000532462 PYGL-003 protein_coding Homo_sapiens 0 1299
ENST00000544180 PYGL-002 protein_coding Homo_sapiens 0 1096
ENST00000553872 PYGL-010 retained_intron Homo_sapiens 0 276

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