C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mesoderm induction early response 1, family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109272 Mier3-001 ENSMUSG00000032727 10090 + 13:111686178-111718596 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109272
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109272 2.866±1.23 0.918±0.10 5.096±0.11 3.303±1.93 1.659±0.61 3.751±0.40 1.388±0.51 3.212±0.21 5.049±3.44 1.906±0.26 0.982±0.31 2.171±1.30 3.335±2.23 11.804±1.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089D CIL_00089D_0002 VISTA 13:111652900-112255571

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336942 MIER3-008 protein_coding Homo_sapiens 0 651
ENST00000381199 MIER3-004 protein_coding Homo_sapiens 0 2756
ENST00000381213 MIER3-001 protein_coding Homo_sapiens 0 2758
ENST00000381226 MIER3-003 protein_coding Homo_sapiens 0 2695
ENST00000409421 MIER3-005 protein_coding Homo_sapiens 0 2220
ENST00000452157 MIER3-002 nonsense_mediated_decay Homo_sapiens 0 2531
ENST00000480115 MIER3-006 retained_intron Homo_sapiens 0 409
ENST00000497185 MIER3-010 processed_transcript Homo_sapiens 3e-23 110
ENST00000546593 MIER3-009 processed_transcript Homo_sapiens 1e-21 106

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