C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mesoderm induction early response 1, family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137268 Mier3-005 ENSMUSG00000032727 10090 + 13:111686326-111718593 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverLungMuscleOvaryENSMUST00000137268
Transcript ID Adrenal Breast Colon Liver Lung Muscle Ovary
ENSMUST00000137268 2.418±0.00 1.307±0.00 3.751±1.61 1.634±0.79 1.896±0.62 0.986±0.00 3.518±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089D CIL_00089D_0002 VISTA 13:111652900-112255571

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336942 MIER3-008 protein_coding Homo_sapiens 0 379
ENST00000381199 MIER3-004 protein_coding Homo_sapiens 0 2531
ENST00000381213 MIER3-001 protein_coding Homo_sapiens 0 2531
ENST00000381226 MIER3-003 protein_coding Homo_sapiens 0 2531
ENST00000409421 MIER3-005 protein_coding Homo_sapiens 0 2060
ENST00000452157 MIER3-002 nonsense_mediated_decay Homo_sapiens 0 2785
ENST00000480115 MIER3-006 retained_intron Homo_sapiens 0 409
ENST00000497185 MIER3-010 processed_transcript Homo_sapiens 3e-23 110
ENST00000546593 MIER3-009 processed_transcript Homo_sapiens 1e-21 106

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