C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: autophagy related 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032905 Atg12 10090 - 18:46732417-46741579 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035648 Atg12-201 46732417-46741579 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035648
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035648 20.746±4.45 10.320±0.45 21.310±0.41 18.514±6.12 14.349±2.85 12.243±1.17 6.543±1.97 17.986±1.19 10.163±1.72 10.645±4.13 7.879±0.49 17.086±4.75 29.853±8.94 9.781±3.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004L5 CIL_0004L5_0002 CGP 18:46713205-46741579
CIL_0004L6 CIL_0004L6_0002 CGP 18:46732417-46790826

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000045 IMP autophagic vacuole assembly
GO:0000422 IBA mitochondrion degradation
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0006501 IBA C-terminal protein lipidation
GO:0006914 TAS autophagy
GO:0006995 IBA cellular response to nitrogen starvation
GO:0016020 IEA membrane
GO:0019776 IBA Atg8 ligase activity
GO:0034045 IDA pre-autophagosomal structure membrane
GO:0034274 IBA Atg12-Atg5-Atg16 complex
GO:0043234 IEA protein complex
GO:0044804 IBA nucleophagy
GO:0045087 IEA innate immune response

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069545 atg12 ATG12 autophagy related 12 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSG00000145782 ATG12 autophagy related 12 protein_coding Homo_sapiens

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