C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004L5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000129596-ENSG00000145782 CGP 9606 5:115804733-115841858
GeneTranscriptPositionBiotype
ENSG00000129596 (CDO1)
cysteine dioxygenase type 1 		ENST00000250535 (CDO1-001) 115804733-115816954 protein_coding
ENST00000502631 (CDO1-003) 115805264-115816657 processed_transcript
ENST00000504613 (CDO1-002) 115813189-115816657 processed_transcript
ENST00000504877 (CDO1-004) 115813182-115814481 processed_transcript
ENSG00000177879 (AP3S1)
adaptor-related protein complex 3, sigma 1 subunit 		ENST00000316788 (AP3S1-001) 115841481-115914081 protein_coding
ENST00000395548 (AP3S1-003) 115841997-115914011 retained_intron
ENST00000505423 (AP3S1-006) 115895087-115913900 processed_transcript
ENST00000506430 (AP3S1-008) 115841958-115913457 nonsense_mediated_decay
ENST00000507436 (AP3S1-007) 115866661-115895162 retained_intron
ENST00000509055 (AP3S1-005) 115842487-115870131 retained_intron
ENST00000514118 (AP3S1-004) 115841592-115870131 processed_transcript
ENST00000515066 (AP3S1-002) 115841946-115904088 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0004L5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033022-ENSMUSG00000032905 CGP 10090 18:46713205-46741579
GeneTranscriptPositionBiotype
ENSMUSG00000032905 (Atg12)
autophagy related 12 		ENSMUST00000035648 (Atg12-201) 46732417-46741579 protein_coding
ENSMUSG00000033022 (Cdo1)
cysteine dioxygenase 1, cytosolic 		ENSMUST00000035804 (Cdo1-201) 46713205-46728342 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004L5_0001ENSG00000129596ENST00000250535ENST00000502631ENST00000504613ENST00000504877ENSG00000177879ENST00000316788ENST00000395548ENST00000505423ENST00000506430ENST00000507436ENST00000509055ENST00000514118ENST00000515066CIL_0004L5_0002ENSMUSG00000032905ENSMUST00000035648ENSMUSG00000033022ENSMUST00000035804
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004L5_0001ENSG00000129596ENST00000250535ENST00000502631ENST00000504613ENSG00000177879ENST00000316788ENST00000395548ENST00000505423ENST00000506430CIL_0004L5_0002ENSMUSG00000032905ENSMUST00000035648ENSMUSG00000033022ENSMUST00000035804
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000129596 ENST00000250535 8.654±0.00 0.384±0.00 0.130±0.00 11.168±2.67 24.290±22.38 1.827±1.02 2.498±2.19 17.971±16.80 17.740±14.08 4.514±2.81 0.717±0.65 4.796±4.56 22.789±5.46 14.161±0.00
ENST00000502631 2.590±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.064±0.00 N/A N/A N/A
ENST00000504613 N/A 2.144±0.00 N/A N/A 5.821±0.00 3.361±0.00 1.348±0.00 76.837±0.00 4.846±0.00 3.434±0.00 1.970±0.00 5.989±0.00 N/A N/A
ENST00000504877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177879 ENST00000316788 19.097±0.00 15.584±0.00 N/A 15.078±0.00 16.069±0.00 24.276±0.00 7.549±0.00 10.245±0.00 7.287±0.00 22.687±0.00 4.918±0.00 22.540±14.77 28.690±3.17 20.712±9.81
ENST00000395548 17.277±0.00 11.893±0.00 N/A 12.974±0.00 11.856±0.26 8.526±3.34 2.561±0.00 5.763±0.13 10.466±5.63 6.608±0.00 2.462±0.00 10.326±0.56 N/A 14.719±1.74
ENST00000505423 N/A N/A N/A 21.025±0.00 17.395±0.00 N/A N/A 12.061±0.00 7.601±0.00 N/A 7.152±0.00 N/A N/A N/A
ENST00000506430 N/A N/A 10.149±0.00 18.795±0.00 19.036±0.00 10.283±0.00 4.679±0.00 9.112±0.00 N/A 10.197±0.00 N/A 11.720±0.00 16.262±0.00 26.525±0.00
ENST00000507436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032905 ENSMUST00000035648 20.746±4.45 10.320±0.45 21.310±0.41 18.514±6.12 14.349±2.85 12.243±1.17 6.543±1.97 17.986±1.19 10.163±1.72 10.645±4.13 7.879±0.49 17.086±4.75 29.853±8.94 9.781±3.20
ENSMUSG00000033022 ENSMUST00000035804 558.288±181.19 589.948±102.94 25.954±6.22 19.553±5.82 455.792±245.37 21.199±4.01 9.356±3.94 67.872±11.62 788.477±757.24 128.304±39.33 2.865±2.15 67.757±26.37 16.218±12.64 3.646±2.00

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