C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: golgi associated, gamma adaptin ear containing, ARF binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033128 Gga1 10090 + 15:78877190-78894585 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041587 Gga1-201 78877190-78894585 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041587
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041587 19.870±2.81 29.025±2.46 23.127±1.21 18.252±5.27 21.518±10.75 29.862±6.15 13.080±1.44 15.307±3.28 11.433±1.98 28.670±4.26 17.668±1.54 23.343±6.90 16.443±3.04 26.155±9.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040E CIL_00040E_0002 CGP 15:78850862-78894585
CIL_00099H CIL_00099H_0002 VISTA 15:78863840-79464236
CIL_0008KJ CIL_0008KJ_0002 VISTA 15:78865517-79466323
CIL_0008BX CIL_0008BX_0002 VISTA 15:78873761-79474273
CIL_0008KA CIL_0008KA_0002 VISTA 15:78875821-79476550
CIL_00040D CIL_00040D_0002 CGP 15:78877190-78919517

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005768 IEA endosome
GO:0005794 IEA Golgi apparatus
GO:0006886 IEA intracellular protein transport
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0030131 IEA clathrin adaptor complex
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0045732 IGI positive regulation of protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038537 gga1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 protein_coding Danio_rerio
ENSG00000100083 GGA1 golgi-associated, gamma adaptin ear containing, ARF binding protein 1 protein_coding Homo_sapiens

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