C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00040E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100079-ENSG00000100083 CGP 9606 22:37570246-37633564
GeneTranscriptPositionBiotype
ENSG00000100079 (LGALS2)
lectin, galactoside-binding, soluble, 2 		ENST00000215886 (LGALS2-001) 37570246-37580080 protein_coding
ENST00000416480 (LGALS2-002) 37571849-37582616 protein_coding
ENSG00000100083 (GGA1)
golgi-associated, gamma adaptin ear containing, ARF binding protein 1 		ENST00000325180 (GGA1-024) 37608845-37633564 protein_coding
ENST00000326597 (GGA1-018) 37612536-37620267 protein_coding
ENST00000343632 (GGA1-001) 37608475-37633564 protein_coding
ENST00000381756 (GGA1-002) 37608725-37632711 protein_coding
ENST00000405147 (GGA1-007) 37608834-37620044 protein_coding
ENST00000406772 (GGA1-003) 37609040-37633563 protein_coding
ENST00000411501 (GGA1-008) 37608960-37620275 protein_coding
ENST00000413251 (GGA1-015) 37613970-37621632 protein_coding
ENST00000423024 (GGA1-019) 37614133-37621632 protein_coding
ENST00000429218 (GGA1-010) 37608835-37621631 protein_coding
ENST00000431745 (GGA1-011) 37609060-37618515 protein_coding
ENST00000439161 (GGA1-009) 37608935-37620332 protein_coding
ENST00000447515 (GGA1-017) 37609040-37618546 protein_coding
ENST00000449944 (GGA1-016) 37608948-37623564 protein_coding
ENST00000453208 (GGA1-012) 37608977-37620816 protein_coding
ENST00000460957 (GGA1-022) 37630668-37632677 retained_intron
ENST00000463672 (GGA1-023) 37629462-37630299 retained_intron
ENST00000475445 (GGA1-006) 37623829-37627162 retained_intron
ENST00000481613 (GGA1-021) 37620854-37623916 retained_intron
ENST00000484804 (GGA1-013) 37609066-37614274 processed_transcript
ENST00000488672 (GGA1-014) 37610142-37614195 processed_transcript
ENST00000489772 (GGA1-005) 37608830-37618146 retained_intron
ENST00000491295 (GGA1-020) 37618403-37620249 retained_intron
ENSG00000273866 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000615981 (Metazoa_SRP.1-249) 37578669-37578922 misc_RNA
CIL_00040E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000043501-ENSMUSG00000033128 CGP 10090 15:78850862-78894585
GeneTranscriptPositionBiotype
ENSMUSG00000033128 (Gga1)
golgi associated, gamma adaptin ear containing, ARF binding protein 1 		ENSMUST00000041587 (Gga1-201) 78877190-78894585 protein_coding
ENSMUSG00000043501 (Lgals2)
lectin, galactose-binding, soluble 2 		ENSMUST00000044584 (Lgals2-201) 78850862-78855529 protein_coding
ENSMUSG00000049521 (Cdc42ep1)
CDC42 effector protein (Rho GTPase binding) 1 		ENSMUST00000059619 (Cdc42ep1-201) 78842647-78850902 protein_coding
ENSMUSG00000097085 (Gm26634)
predicted gene, 26634 		ENSMUST00000181146 (Gm26634-201) 78862956-78866889 lincRNA
ENSMUSG00000099267 (Mir6955)
microRNA 6955 		ENSMUST00000183370 (Mir6955-201) 78891840-78891913 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00040E_0001ENSG00000100079ENST00000215886ENST00000416480ENSG00000100083ENST00000325180ENST00000326597ENST00000343632ENST00000381756ENST00000405147ENST00000406772ENST00000411501ENST00000413251ENST00000423024ENST00000429218ENST00000431745ENST00000439161ENST00000447515ENST00000449944ENST00000453208ENST00000460957ENST00000463672ENST00000475445ENST00000481613ENST00000484804ENST00000488672ENST00000489772ENST00000491295ENSG00000273866ENST00000615981CIL_00040E_0002ENSMUSG00000033128ENSMUST00000041587ENSMUSG00000043501ENSMUST00000044584ENSMUSG00000049521ENSMUST00000059619ENSMUSG00000097085ENSMUST00000181146ENSMUSG00000099267ENSMUST00000183370
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00040E_0001ENSG00000100079ENST00000215886ENST00000416480ENSG00000100083ENST00000325180ENST00000343632ENST00000381756ENST00000406772ENST00000449944ENST00000460957ENST00000463672ENST00000481613ENST00000489772ENSG00000273866ENST00000615981CIL_00040E_0002ENSMUSG00000033128ENSMUST00000041587ENSMUSG00000043501ENSMUST00000044584ENSMUSG00000049521ENSMUST00000059619ENSMUSG00000097085ENSMUST00000181146ENSMUSG00000099267ENSMUST00000183370
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100079 ENST00000215886 0.425±0.00 4.767±0.00 2.404±0.00 0.114±0.00 1.209±0.31 2.224±0.25 0.344±0.00 30.554±28.83 0.737±0.34 1.057±0.26 N/A 2.767±2.30 0.622±0.17 0.631±0.45
ENST00000416480 N/A N/A N/A 0.045±0.00 N/A N/A N/A N/A N/A N/A N/A 1.323±0.00 N/A N/A
ENSG00000100083 ENST00000325180 5.773±0.00 6.050±0.00 N/A 2.605±1.97 5.030±0.00 5.754±0.00 1.927±1.66 5.153±4.88 2.016±0.00 5.724±0.00 12.081±0.00 4.042±2.93 4.385±1.35 24.676±3.03
ENST00000326597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000343632 1.861±0.00 3.665±0.00 N/A 4.964±0.00 3.294±0.00 N/A 3.470±0.00 7.109±0.00 N/A 2.036±1.41 6.161±0.00 11.525±5.91 2.366±0.36 34.806±0.00
ENST00000381756 5.325±0.00 N/A 1.345±0.00 2.904±2.14 1.008±0.00 1.805±0.00 N/A 1.212±0.00 N/A 1.172±0.00 N/A 8.313±0.00 N/A N/A
ENST00000405147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406772 N/A 3.071±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.929±0.00
ENST00000411501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449944 N/A N/A N/A N/A 2.158±0.00 N/A N/A N/A 1.374±0.00 N/A N/A N/A N/A N/A
ENST00000453208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460957 N/A N/A N/A N/A 4.614±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.162±0.00 N/A N/A N/A
ENST00000475445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.199±0.00 N/A N/A N/A
ENST00000484804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489772 N/A N/A N/A 0.608±0.00 0.856±0.00 2.774±0.00 N/A 1.020±0.00 N/A N/A N/A 1.530±0.00 N/A N/A
ENST00000491295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000273866 ENST00000615981 0.691±0.00 3.024±0.00 N/A 0.975±0.00 1.580±0.00 0.137±0.00 1.069±0.00 1.943±0.00 0.123±0.00 0.201±0.00 0.188±0.00 0.731±0.07 N/A 1.192±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033128 ENSMUST00000041587 19.870±2.81 29.025±2.46 23.127±1.21 18.252±5.27 21.518±10.75 29.862±6.15 13.080±1.44 15.307±3.28 11.433±1.98 28.670±4.26 17.668±1.54 23.343±6.90 16.443±3.04 26.155±9.85
ENSMUSG00000043501 ENSMUST00000044584 N/A N/A N/A N/A N/A N/A N/A N/A 8.901±1.35 N/A N/A 9.090±0.00 146.773±135.59 0.896±0.02
ENSMUSG00000049521 ENSMUST00000059619 87.171±48.33 44.528±6.46 10.244±0.58 3.697±0.54 43.511±15.06 22.958±1.14 20.139±4.90 23.301±2.20 12.598±4.10 102.647±19.39 4.563±0.61 31.291±8.95 11.650±2.78 0.975±0.45
ENSMUSG00000097085 ENSMUST00000181146 0.120±0.04 0.053±0.00 0.050±0.02 0.019±0.02 0.141±0.06 0.218±0.11 0.020±0.00 0.064±0.03 0.022±0.01 0.160±0.05 0.035±0.00 0.187±0.09 0.062±0.04 0.126±0.07
ENSMUSG00000099267 ENSMUST00000183370 28132.600±0.00 N/A N/A N/A N/A 97492.703±0.00 N/A N/A N/A N/A N/A 303.137±0.00 N/A N/A

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