C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 35, member A4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036158 Slc35a4-001 ENSMUSG00000033272 10090 + 18:36679592-36683858 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036158
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036158 47.511±3.95 88.696±2.36 26.366±0.61 14.681±7.28 65.139±7.90 71.574±12.76 20.263±1.06 40.502±4.15 20.083±14.26 52.937±3.42 11.107±0.42 76.892±35.71 22.274±8.81 4.012±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZN CIL_0006ZN_0002 CGP 18:36664060-36679366
CIL_0006ZI CIL_0006ZI_0002 CGP 18:36666681-36683861

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0003674 ND molecular_function
GO:0005351 IEA sugar:proton symporter activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008643 IEA carbohydrate transport
GO:0015992 IEA proton transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323146 SLC35A4-001 protein_coding Homo_sapiens 0 1428
ENST00000508770 SLC35A4-002 processed_transcript Homo_sapiens 0 496
ENST00000514137 SLC35A4-003 retained_intron Homo_sapiens 0 377
ENST00000514199 SLC35A4-004 protein_coding Homo_sapiens 0 1380
ENST00000612662 SLC35A4-201 protein_coding Homo_sapiens 0 1415
ENST00000623481 SLC35A4-006 protein_coding Homo_sapiens 0 425

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