C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 35, member A4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000050476 Slc35a4-002 ENSMUSG00000033272 10090 + 18:36679579-36683853 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000050476
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000050476 30.294±6.21 37.310±3.25 18.746±1.02 16.570±2.48 30.080±3.47 39.047±5.56 19.379±2.29 29.296±3.34 13.718±9.07 23.826±4.45 13.825±1.59 28.846±10.66 12.066±3.06 4.097±0.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZN CIL_0006ZN_0002 CGP 18:36664060-36679366
CIL_0006ZI CIL_0006ZI_0002 CGP 18:36666681-36683861

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0003674 ND molecular_function
GO:0005351 IEA sugar:proton symporter activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008643 IEA carbohydrate transport
GO:0015992 IEA proton transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323146 SLC35A4-001 protein_coding Homo_sapiens 0 1085
ENST00000508770 SLC35A4-002 processed_transcript Homo_sapiens 0 414
ENST00000514137 SLC35A4-003 retained_intron Homo_sapiens 0 348
ENST00000514199 SLC35A4-004 protein_coding Homo_sapiens 0 1085
ENST00000612662 SLC35A4-201 protein_coding Homo_sapiens 0 1085
ENST00000623481 SLC35A4-006 protein_coding Homo_sapiens 0 414

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