C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spastic paraplegia 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033396 Spg11 10090 - 2:122053520-122118386 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000036450 Spg11-001 122053520-122118386 protein_coding
  ENSMUST00000133145 Spg11-002 122093540-122118296 processed_transcript
  ENSMUST00000135847 Spg11-003 122107666-122118375 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036450
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036450 4.914±0.67 3.478±1.27 3.340±0.63 4.557±1.64 3.216±0.61 4.356±1.53 1.786±0.26 2.862±0.66 2.290±0.34 5.211±0.41 1.578±0.07 5.710±1.40 4.921±0.28 3.437±1.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000686 CIL_000686_0002 CGP 2:121956001-122056598
CIL_0004DI CIL_0004DI_0002 CGP 2:122028546-122118386
CIL_0004DJ CIL_0004DJ_0002 CGP 2:122053520-122186189

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005765 IEA lysosomal membrane
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045968 spg11 spastic paraplegia 11 protein_coding Danio_rerio
ENSG00000104133 SPG11 spastic paraplegia 11 (autosomal recessive) protein_coding Homo_sapiens

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