C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polycomb group ring finger 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033623 Pcgf3 10090 + 5:108461232-108506976 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046975 Pcgf3-001 108461232-108506976 protein_coding
  ENSMUST00000112597 Pcgf3-002 108461232-108489224 protein_coding
  ENSMUST00000138264 Pcgf3-003 108461313-108486171 processed_transcript
  ENSMUST00000143973 Pcgf3-004 108473887-108478510 processed_transcript
  ENSMUST00000151897 Pcgf3-005 108486220-108496290 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046975ENSMUST00000112597ENSMUST00000138264
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046975 4.799±1.72 3.845±0.86 6.209±0.19 6.370±5.10 3.902±0.94 7.739±1.33 3.661±0.20 4.688±0.35 3.061±0.92 6.637±0.48 4.345±1.08 6.694±1.64 6.290±3.00 1.745±0.77
ENSMUST00000112597 N/A 1.940±0.08 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138264 N/A N/A N/A 10.774±0.00 N/A N/A N/A N/A N/A N/A N/A 19.446±0.00 23.047±2.88 12.351±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CG CIL_0006CG_0002 CGP 5:108441054-108506976
CIL_0006LT CIL_0006LT_0002 CGP 5:108461232-108550024

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0031519 ISS PcG protein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000185619 PCGF3 polycomb group ring finger 3 protein_coding Homo_sapiens

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