C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: polycomb group ring finger 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138264 Pcgf3-003 ENSMUSG00000033623 10090 + 5:108461313-108486171 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000138264
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000138264 10.774±0.00 19.446±0.00 23.047±2.88 12.351±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CG CIL_0006CG_0002 CGP 5:108441054-108506976
CIL_0006LT CIL_0006LT_0002 CGP 5:108461232-108550024

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000362003 PCGF3-001 protein_coding Homo_sapiens 0 405
ENST00000400151 PCGF3-009 protein_coding Homo_sapiens 0 405
ENST00000419774 PCGF3-007 protein_coding Homo_sapiens 0 257
ENST00000427463 PCGF3-012 protein_coding Homo_sapiens 0 344
ENST00000430644 PCGF3-003 nonsense_mediated_decay Homo_sapiens 0 396
ENST00000433814 PCGF3-005 protein_coding Homo_sapiens 0 220
ENST00000440452 PCGF3-002 nonsense_mediated_decay Homo_sapiens 2e-34 152
ENST00000470161 PCGF3-004 protein_coding Homo_sapiens 0 344
ENST00000475288 PCGF3-006 retained_intron Homo_sapiens 0 257
ENST00000482726 PCGF3-008 processed_transcript Homo_sapiens 0 405
ENST00000484141 PCGF3-011 retained_intron Homo_sapiens 0 333
ENST00000505655 PCGF3-201 protein_coding Homo_sapiens 3e-40 171

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