C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: splicing factor 3b, subunit 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033732 Sf3b3 10090 - 8:110810492-110846803 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042012 Sf3b3-201 110810492-110846803 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042012
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042012 26.117±11.63 16.634±5.29 15.783±0.17 24.497±9.43 20.573±5.80 14.447±4.39 10.464±0.54 13.354±0.32 18.221±11.99 18.916±1.16 4.709±0.33 35.212±5.91 28.609±12.97 10.226±0.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000CK CIL_0000CK_0002 CGP 8:110741829-110846803

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005689 IEA U12-type spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0071013 IEA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089880 sf3b3 splicing factor 3b, subunit 3 protein_coding Danio_rerio
ENSG00000189091 SF3B3 splicing factor 3b, subunit 3, 130kDa protein_coding Homo_sapiens

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