C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin specific peptidase 36
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033909 Usp36 10090 - 11:118259651-118290244 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000092382 Usp36-201 118259653-118290244 protein_coding
  ENSMUST00000106296 Usp36-001 118259651-118290231 protein_coding
  ENSMUST00000141647 Usp36-004 118259654-118266048 retained_intron
  ENSMUST00000144153 Usp36-003 118262388-118290180 protein_coding
  ENSMUST00000148998 Usp36-005 118260854-118263284 retained_intron
  ENSMUST00000151433 Usp36-002 118283795-118290072 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000092382ENSMUST00000106296ENSMUST00000141647ENSMUST00000144153ENSMUST00000148998
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000092382 N/A N/A N/A 1.048±0.00 N/A N/A N/A N/A N/A N/A 1.895±0.00 3.883±0.00 3.655±0.74 N/A
ENSMUST00000106296 5.141±2.75 4.014±1.12 5.328±0.20 4.164±0.93 4.813±0.46 4.769±0.54 3.670±0.50 2.830±0.86 3.058±0.76 6.251±1.79 3.694±0.88 6.563±2.34 3.575±0.72 0.907±0.16
ENSMUST00000141647 N/A 1.901±0.00 1.411±0.00 N/A N/A N/A N/A N/A 0.588±0.10 1.541±0.17 N/A 2.439±0.82 1.640±0.28 0.593±0.00
ENSMUST00000144153 N/A 2.606±0.30 N/A 2.293±0.00 3.219±0.12 2.290±0.50 N/A N/A N/A 2.044±0.00 N/A 3.093±0.29 4.279±1.42 0.828±0.17
ENSMUST00000148998 3.794±0.00 6.647±0.23 N/A N/A N/A 6.878±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00062I CIL_00062I_0002 CGP 11:118132019-118290244
CIL_0003UE CIL_0003UE_0003 CGP 11:118259651-118355740

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004843 IEA ubiquitin-specific protease activity
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0016579 IEA protein deubiquitination
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032327 usp36 ubiquitin specific peptidase 36 protein_coding Danio_rerio
ENSG00000055483 USP36 ubiquitin specific peptidase 36 protein_coding Homo_sapiens

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